<div dir="ltr">Stephen,<div><br></div><div>My system does have qmake at /usr/bin, as shown by 'which qmake'. When running ccmake the first time for TubeTK, ccmake found this system qmake. Once I choose to build Slicer extension and give the Slicer-build directory, I got the following error:</div>
<div><br></div><div><div> CMake Error at /home/sci/weiliu/projects/Slicer-SuperBuild-Rel/Slicer-build/SlicerConfig.cmake:547 (message):</div><div> Variable QT_QMAKE_EXECUTABLE defined prior calling 'find_package(Slicer)'</div>
<div> does NOT match value used to configure Slicer. It probably means that a</div><div> different QT_QMAKE_EXECUTABLE has been used to configure this project and</div><div> Slicer.</div><div><br></div><div> QT_QMAKE_EXECUTABLE=/usr/bin/qmake</div>
<div><br></div><div><br></div><div> Slicer_QT_QMAKE_EXECUTABLE=/home/sci/weiliu/QtSDK/Desktop/Qt/474/gcc/bin/qmake</div><div> Call Stack (most recent call first):</div><div> /home/sci/weiliu/projects/Slicer-SuperBuild-Rel/Slicer-build/SlicerConfig.cmake:565 (slicer_config_set_ep)</div>
<div> CMakeLists.txt:175 (find_package)</div></div><div><br></div><div><br></div><div><br></div><div><br></div><div>To get rid of this error, I have to manually set the qmake to the one in the QtSDK that I downloaded from Slicer website.</div>
<div><br></div><div>Wei</div></div><div class="gmail_extra"><br><br><div class="gmail_quote">On Sun, Feb 2, 2014 at 5:47 PM, Stephen Aylward <span dir="ltr"><<a href="mailto:stephen.aylward@kitware.com" target="_blank">stephen.aylward@kitware.com</a>></span> wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><p dir="ltr">Ah. It shouldn't be asking for qmake. It should get that from the slicer build info.</p>
<p dir="ltr">Perhaps it is mixing a system qt with the version used to build slicer. We have tested that in the past, but it might not be working now.</p>
<p dir="ltr">If you type "which qmake" does it return a path to another qmake?</p><div class="im HOEnZb">
<p dir="ltr">S<br>
--<br>
Sent via phone. Please excuse the brevity and typos.</p>
<p dir="ltr">--<br>
Stephen R. Aylward, Ph.D.<br>
Senior Director of Operations<br>
Kitware, North Carolina</p>
</div><div class="HOEnZb"><div class="h5"><div class="gmail_quote">On Feb 2, 2014 6:42 PM, "Wei Liu" <<a href="mailto:weiliu620@gmail.com" target="_blank">weiliu620@gmail.com</a>> wrote:<br type="attribution">
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
<div dir="ltr">Christopher,<div><br></div><div>Here is what I found under the QT SDK directory that I downloaded from Slicer website: </div><div><br></div><div><div>weiliu@wukong:~/QtSDK/Desktop/Qt/474/gcc/lib> ll libQtWebKit.*</div>
<div>-rw-r--r-- 1 weiliu sci 934 Jan 22 10:29 libQtWebKit.la</div><div>lrwxrwxrwx 1 weiliu sci 20 Jan 22 10:29 libQtWebKit.so -> libQtWebKit.so.4.7.4</div><div>lrwxrwxrwx 1 weiliu sci 20 Jan 22 10:29 libQtWebKit.so.4 -> libQtWebKit.so.4.7.4</div>
<div>lrwxrwxrwx 1 weiliu sci 20 Jan 22 10:29 libQtWebKit.so.4.7 -> libQtWebKit.so.4.7.4</div><div>-rwxr-xr-x 1 weiliu sci 22791816 Jan 22 10:29 libQtWebKit.so.4.7.4</div></div><div><br></div><div>In the ccmake of TubeTK, if I just set Slicer build directory in order to build Slicer extension, I got error that says qmake should be same with the one that is used to build Slicer. So I point the qmake to the one under QT SDK. The configuration then goes through, so I suppose the setting is correct. </div>
<div><br></div><div>Wei</div></div><div class="gmail_extra"><br><br><div class="gmail_quote">On Sun, Feb 2, 2014 at 4:32 PM, Christopher Mullins <span dir="ltr"><<a href="mailto:christopher.mullins@kitware.com" target="_blank">christopher.mullins@kitware.com</a>></span> wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr">Can you confirm that you built or installed Qt with webkit? You should have the file libQtWebKit.so somewhere in the build tree or installation directory. Also make sure your QT_QMAKE_EXECUTABLE is set correctly.</div>
<div class="gmail_extra"><div><div><br><br><div class="gmail_quote">On Sun, Feb 2, 2014 at 5:40 PM, Wei Liu <span dir="ltr"><<a href="mailto:weiliu620@gmail.com" target="_blank">weiliu620@gmail.com</a>></span> wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
<div dir="ltr">Stephen,<div><br></div><div>I did what you suggested. However, after step 3) and choose 'configure' in ccmake, I got the same error message that I reported to you in a different email thread. The error is: </div>
<div><br></div><div><div> CMake Error at /home/sci/weiliu/packages/Slicer/CMake/SlicerBlockFindQtAndCheckVersion.cmake:43 (message):</div><div> error: Missing Qt module QTWEBKIT</div><div> Call Stack (most recent call first):</div>
<div> /home/sci/weiliu/packages/Slicer/CMake/SlicerBlockFindQtAndCheckVersion.cmake:72 (__SlicerBlockFindQtAndCheckVersion_find_qt)</div><div> /home/sci/weiliu/projects/Slicer-SuperBuild-Rel/Slicer-build/SlicerConfig.cmake:760 (include)</div>
<div> CMakeLists.txt:175 (find_package)</div></div><div><br></div><div><br></div><div>I've made sure that I start from an empty build directory. By the way, my Slicer build is a good one. I used a customized QT SDK (version 474) from [1]. </div>
<div><br></div><div>[1] <a href="http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Developers/Build_Instructions/Prerequisites/Qt#Download_Qt:_Source_and_Binaries" target="_blank">http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Developers/Build_Instructions/Prerequisites/Qt#Download_Qt:_Source_and_Binaries</a><span><font color="#888888"><br>
</font></span></div><span><font color="#888888"><div><br></div><div>Wei</div></font></span></div><div><div><div class="gmail_extra"><br><br><div class="gmail_quote">On Sun, Feb 2, 2014 at 1:40 PM, Stephen Aylward <span dir="ltr"><<a href="mailto:stephen.aylward@kitware.com" target="_blank">stephen.aylward@kitware.com</a>></span> wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">Only options to change are<br>
<br>
1) TubeTK_BUILD_SLICER_EXTENSION = ON<br>
2) TubeTK_USE_SLICER = ON<br>
<br>
Then type [c] to configure. This will produce an error message if<br>
Slicer isn't automatically found...so<br>
<br>
3) Slicer_DIR = <YourPathToSlicerBuild>/Slicer-build<br>
-- Yes, point it to the Slicer-build subdir that is within the<br>
top-level directory in which Slicer was built.<br>
<br>
Do not change any other options.<br>
<br>
You should do this in an empty build directory. There are likely to<br>
be problems if you try to switch a current build from being a<br>
stand-alone build to being a Slicer-dependent build.<br>
<br>
s<br>
<div><div><br>
<br>
On Sun, Feb 2, 2014 at 2:49 PM, Wei Liu <<a href="mailto:weiliu620@gmail.com" target="_blank">weiliu620@gmail.com</a>> wrote:<br>
> Thanks, Matt and Stephen. I checked the CmakeOutput.log file under VTK-build<br>
> and didn't find any errors. Is that the best way to check build logs?<br>
><br>
> I do have a recent Slicer build that includes VTK. Let me try to point<br>
> TubeTK to it and see what happens.<br>
><br>
> Wei<br>
><br>
><br>
> On Sun, Feb 2, 2014 at 12:34 PM, Stephen Aylward<br>
> <<a href="mailto:stephen.aylward@kitware.com" target="_blank">stephen.aylward@kitware.com</a>> wrote:<br>
>><br>
>> Also, Ricardo is building it on opensuse. It seems to be failing on the<br>
>> vtk build. Perhaps try building vtk on its own via <a href="http://vtk.org" target="_blank">vtk.org</a> or build slicer<br>
>> and point tubetk to it...see <a href="http://slicer.org" target="_blank">slicer.org</a><br>
>><br>
>> S<br>
>><br>
>> --<br>
>> Sent via phone. Please excuse the brevity and typos.<br>
>><br>
>> --<br>
>> Stephen R. Aylward, Ph.D.<br>
>> Senior Director of Operations<br>
>> Kitware, North Carolina<br>
>><br>
>> On Feb 2, 2014 2:31 PM, "Matt McCormick" <<a href="mailto:matt.mccormick@kitware.com" target="_blank">matt.mccormick@kitware.com</a>><br>
>> wrote:<br>
>>><br>
>>> Hi Wei,<br>
>>><br>
>>> Builds reporting to the dashboard should be reproducible (there is<br>
>>> Debian Stable and Ubuntu 12.04 and 13.04 reporting):<br>
>>><br>
>>> <a href="http://open.cdash.org/index.php?project=TubeTK" target="_blank">http://open.cdash.org/index.php?project=TubeTK</a><br>
>>><br>
>>> If further help is needed, we can give personalized attention with a<br>
>>> support contract:<br>
>>><br>
>>> <a href="http://www.kitware.com/products/support.html" target="_blank">http://www.kitware.com/products/support.html</a><br>
>>><br>
>>> Thanks,<br>
>>> Matt<br>
>>><br>
>>> On Sun, Feb 2, 2014 at 11:51 AM, Wei Liu <<a href="mailto:weiliu620@gmail.com" target="_blank">weiliu620@gmail.com</a>> wrote:<br>
>>> > Oops, I sent previous email before finishing it.<br>
>>> ><br>
>>> > Yes Matt, I meant TubeTK_USE_VTK. So, I started a clean build, with<br>
>>> > all<br>
>>> > cmake options set to default (the UtbeT_USE_VTK = ON). Now I have<br>
>>> > different<br>
>>> > errors:<br>
>>> ><br>
>>> > ./CropImage: symbol lookup error:<br>
>>> ><br>
>>> > /home/sci/weiliu/packages/TubeTK-Release/VTK-build/bin/libvtkInfovis.so.5.10:<br>
>>> > undefined symbol: _ZTI8vtkArray<br>
>>> ><br>
>>> > I don't remember the exact difference between this build and the<br>
>>> > previous<br>
>>> > one. The difference may be some Cmake options.<br>
>>> ><br>
>>> > Do you suggest me to use another OS, like ubuntu or Redhat-based OS?<br>
>>> ><br>
>>> > Wei<br>
>>> ><br>
>>> ><br>
>>> ><br>
>>> > On Fri, Jan 31, 2014 at 5:46 PM, Matt McCormick<br>
>>> > <<a href="mailto:matt.mccormick@kitware.com" target="_blank">matt.mccormick@kitware.com</a>><br>
>>> > wrote:<br>
>>> >><br>
>>> >> Hmm, the only variable that should be adjusted should be called<br>
>>> >> TubeTK_USE_VTK.<br>
>>> >><br>
>>> >> Starting a clean build with the defaults is good first step.<br>
>>> >><br>
>>> >> Thanks,<br>
>>> >> Matt<br>
>>> >><br>
>>> >> On Fri, Jan 31, 2014 at 7:35 PM, Wei Liu <<a href="mailto:weiliu620@gmail.com" target="_blank">weiliu620@gmail.com</a>> wrote:<br>
>>> >> > Matt,<br>
>>> >> ><br>
>>> >> > I didn't install VTK in the system, and I double checked the<br>
>>> >> > /usr/lib<br>
>>> >> > and<br>
>>> >> > lib64 directory.<br>
>>> >> ><br>
>>> >> > I built with the USE_VTK set to off. Is that a possible reason? I'm<br>
>>> >> > re-building TubeTK with it on now.<br>
>>> >> ><br>
>>> >> > Wei<br>
>>> >> ><br>
>>> >> ><br>
>>> >> ><br>
>>> >> ><br>
>>> >> > On Fri, Jan 31, 2014 at 4:08 PM, Matt McCormick<br>
>>> >> > <<a href="mailto:matt.mccormick@kitware.com" target="_blank">matt.mccormick@kitware.com</a>><br>
>>> >> > wrote:<br>
>>> >> >><br>
>>> >> >> Hi Wei,<br>
>>> >> >><br>
>>> >> >> This is not expected. Is a system VTK installed?<br>
>>> >> >><br>
>>> >> >> Thanks,<br>
>>> >> >> Matt<br>
>>> >> >><br>
>>> >> >><br>
>>> >> >><br>
>>> >> >> On Fri, Jan 31, 2014 at 5:58 PM, Wei Liu <<a href="mailto:weiliu620@gmail.com" target="_blank">weiliu620@gmail.com</a>><br>
>>> >> >> wrote:<br>
>>> >> >> > Dear TubeTK developers,<br>
>>> >> >> ><br>
>>> >> >> > I've successfully built TubeTK in release mode. But when I try to<br>
>>> >> >> > run<br>
>>> >> >> > one of<br>
>>> >> >> > the commands in TubeTK-build/bin/ I got the following error:<br>
>>> >> >> ><br>
>>> >> >> > ./CropImage: symbol lookup error:<br>
>>> >> >> ><br>
>>> >> >> ><br>
>>> >> >> ><br>
>>> >> >> > /home/sci/weiliu/packages/TubeTK-Release/VTK-build/bin/libvtkInfovis.so.5.10:<br>
>>> >> >> > undefined symbol: _ZTI21vtkArrayDataAlgorithm<br>
>>> >> >> ><br>
>>> >> >> > I'm using gcc 4.7.1 under opensuse 12.2 64 bit. And I just let<br>
>>> >> >> > tubetk<br>
>>> >> >> > to<br>
>>> >> >> > build everything including ITK and VTK. Actually I got the same<br>
>>> >> >> > error<br>
>>> >> >> > when<br>
>>> >> >> > trying to run other commands.<br>
>>> >> >> ><br>
>>> >> >> > Is this error expected at this stage of development?<br>
>>> >> >> ><br>
>>> >> >> > Thanks,<br>
>>> >> >> > Wei<br>
>>> >> >> ><br>
>>> >> >> > _______________________________________________<br>
>>> >> >> > Tubetk-developers mailing list<br>
>>> >> >> > <a href="mailto:Tubetk-developers@tubetk.org" target="_blank">Tubetk-developers@tubetk.org</a><br>
>>> >> >> ><br>
>>> >> >> > <a href="http://public.kitware.com/cgi-bin/mailman/listinfo/tubetk-developers" target="_blank">http://public.kitware.com/cgi-bin/mailman/listinfo/tubetk-developers</a><br>
>>> >> >> ><br>
>>> >> ><br>
>>> >> ><br>
>>> ><br>
>>> ><br>
>>> _______________________________________________<br>
>>> Tubetk-developers mailing list<br>
>>> <a href="mailto:Tubetk-developers@tubetk.org" target="_blank">Tubetk-developers@tubetk.org</a><br>
>>> <a href="http://public.kitware.com/cgi-bin/mailman/listinfo/tubetk-developers" target="_blank">http://public.kitware.com/cgi-bin/mailman/listinfo/tubetk-developers</a><br>
><br>
><br>
<br>
<br>
<br>
</div></div><span><font color="#888888">--<br>
<br>
====================================================<br>
Stephen R. Aylward, Ph.D.<br>
Senior Director of Operations, North Carolina, Kitware, Inc.<br>
<a href="http://www.kitware.com" target="_blank">http://www.kitware.com</a><br>
<a href="http://www.aylward.org" target="_blank">http://www.aylward.org</a><br>
<a href="tel:%28919%29%20969-6990%20x300" value="+19199696990" target="_blank">(919) 969-6990 x300</a><br>
====================================================<br>
</font></span></blockquote></div><br></div>
</div></div><br>_______________________________________________<br>
Tubetk-developers mailing list<br>
<a href="mailto:Tubetk-developers@tubetk.org" target="_blank">Tubetk-developers@tubetk.org</a><br>
<a href="http://public.kitware.com/cgi-bin/mailman/listinfo/tubetk-developers" target="_blank">http://public.kitware.com/cgi-bin/mailman/listinfo/tubetk-developers</a><br>
<br></blockquote></div><br><br clear="all"><div><br></div>-- <br></div></div><span><font color="#888888">Christopher Mullins<div>R&D Engineer</div><div>Kitware Inc.,</div><div><a href="tel:919.869.8871" value="+19198698871" target="_blank">919.869.8871</a></div>
</font></span></div>
</blockquote></div><br></div>
</blockquote></div>
</div></div></blockquote></div><br></div>