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Hi Amjad,<br>
<br>
You can use an ITK extract filter to extract a region that
corresponds to one of your slices (along the axis you want). The
output of the extract filter will be 3D, so you will need to cast it
into a 2D images using an ITK cast filter. <br>
<br>
Cyril<br>
<br>
<div class="moz-cite-prefix">On 05/04/2016 11:04 AM, AMJAD N wrote:<br>
</div>
<blockquote
cite="mid:CAHq1iukV+sVz0wHHMrKz+nn8w0NTkZmqOSsufn8rtkHM96mZXQ@mail.gmail.com"
type="cite">
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<div dir="ltr">Hi all,
<div><br>
</div>
<div>I have wrote code for saving output volume stack as *.tiff.
Currently I am getting output of XY axis. What should I do in
order to get the other axes. </div>
<div>My code is shown below.</div>
<div><br>
</div>
<div>
<div> typedef
itk::StreamingImageFilter<FloatImageType,
FloatImageType> StreamerType;</div>
<div><span class="" style="white-space:pre"> </span>StreamerType::Pointer
streamerBP = StreamerType::New();</div>
<div><span class="" style="white-space:pre"> </span>streamerBP->SetInput(feldkampCUDA->GetOutput());</div>
<div><span class="" style="white-space:pre"> </span>streamerBP->SetNumberOfStreamDivisions(8);</div>
<div><br>
</div>
<div><span class="" style="white-space:pre"> </span>typedef
itk::Image< float, 2 > Image2DType;</div>
<div><span class="" style="white-space:pre"> </span>typedef
itk::ImageSeriesWriter< FloatImageType, Image2DType >
WriterType;</div>
<div><span class="" style="white-space:pre"> </span>WriterType::Pointer
writer = WriterType::New();</div>
<div><span class="" style="white-space:pre"> </span>writer->SetInput(streamerBP->GetOutput());</div>
<div><br>
</div>
<div><span class="" style="white-space:pre"> </span>typedef
itk::NumericSeriesFileNames NameGeneratorType;</div>
<div><span class="" style="white-space:pre"> </span>NameGeneratorType::Pointer
nameGenerator = NameGeneratorType::New();</div>
<div><span class="" style="white-space:pre"> </span>nameGenerator->SetSeriesFormat("Reconstructed_%06d.tif");</div>
<div><span class="" style="white-space:pre"> </span>nameGenerator->SetStartIndex(0);</div>
<div><span class="" style="white-space:pre"> </span>nameGenerator->SetEndIndex(sizeOutput[2]
- 1); // sizeOutput[2] is the Z-axis value of
//reconstructed volume</div>
<div><span class="" style="white-space:pre"> </span>nameGenerator->SetIncrementIndex(1);</div>
<div><span class="" style="white-space:pre"> </span>writer->SetFileNames(nameGenerator->GetFileNames());</div>
<div><span class="" style="white-space:pre"> </span>writer->SetUseCompression(true);</div>
<div><span class="" style="white-space:pre"> </span>writer->Update();</div>
</div>
<div><br>
</div>
<div>PS: My reconstruction works fine.</div>
<div><br>
</div>
<div>Thanks and Regards</div>
<div><br>
</div>
<div>AMJAD N</div>
<div><br>
</div>
</div>
<br>
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<br>
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</pre>
</blockquote>
<br>
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