<div dir="ltr"><div>Hmm, can you check that you've set the vtkCPInputDataDescription grid through the SetGrid() method? You can add in something like "print("input is ", datadescription.GetInputDescriptionByName(<name>).GetGrid())" a couple of places in your Python script to see if there is actually a grid added there for that input.<br><br></div>Best,<div>Andy<br><div class="gmail_extra"><br><div class="gmail_quote">On Tue, Aug 15, 2017 at 3:30 PM, <span dir="ltr"><<a href="mailto:u.utku.turuncoglu@be.itu.edu.tr" target="_blank">u.utku.turuncoglu@be.itu.edu.<wbr>tr</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">Without support of you and also Ben, i could not even reach to this point.<br>
Thanks again. At least, code runs now. I think that this is big<br>
improvement.<br>
<br>
Anyway, both command is working as expected,<br>
<span><br>
> mpirun -np 4 pvbatch <file><br>
> mpirun -np 4 pvbatch -sym <file><br>
<br>
</span>I also tested allinputsgridwriter_new.py with CFullExample (and also<br>
Fortran90FullExample) and it works without any problem. As I mentioned<br>
before, CFullExample was also working before upgrading protobuf (still, i<br>
don't know why). So, it is not a good way to find the source of the<br>
problem.<br>
<br>
--ufuk<br>
<div><div class="m_8669203236763669705h5"><br>
<br>
> Hmm, how about making that Python code into a file and running it with<br>
> both:<br>
> mpirun -np 4 pvbatch <file><br>
> mpirun -np 4 pvbatch -sym <file><br>
><br>
> Just to verify, the allinputsgridwriter.py didn't work with any of the<br>
> Catalyst examples (e.g. CFullExample), correct?<br>
><br>
> I think this is going to be some issue where we continually bisect the<br>
> problem space so I appreciate your patience on this.<br>
><br>
> Best,<br>
> Andy<br>
><br>
> On Tue, Aug 15, 2017 at 2:49 PM, <<a href="mailto:u.utku.turuncoglu@be.itu.edu.tr" target="_blank">u.utku.turuncoglu@be.itu.edu.<wbr>tr</a>> wrote:<br>
><br>
>> Hi,<br>
>><br>
>> Yes. It works and produces same output.<br>
>><br>
>> --ufuk<br>
>><br>
>> > Hi Ufuk,<br>
>> ><br>
>> > It looks like the script line that is not working properly is:<br>
>> > grid =<br>
>> adaptorinput.GetClientSideObje<wbr>ct().GetOutputDataObject(0)<br>
>> ><br>
>> > grid is set to None here for your build. Trying something simpler, in<br>
>> > pvpython can you try the following and let us know if it works:<br>
>> > =============<br>
>> > from paraview.simple import *<br>
>> > a = Wavelet()<br>
>> > a.UpdatePipeline()<br>
>> > b = a.GetClientSideObject()<br>
>> > c = b.GetOutputDataObject(0)<br>
>> > print c<br>
>> > =============<br>
>> ><br>
>> ><br>
>> ><br>
>> > It should give output like the following if it works:<br>
>> > vtkImageData (0x4586a00)<br>
>> > Debug: Off<br>
>> > Modified Time: 204809<br>
>> > Reference Count: 2<br>
>> > Registered Events: (none)<br>
>> > Information: 0x4586450<br>
>> > Data Released: False<br>
>> > Global Release Data: Off<br>
>> > UpdateTime: 204810<br>
>> > Field Data:<br>
>> > Debug: Off<br>
>> > Modified Time: 204775<br>
>> > Reference Count: 1<br>
>> > Registered Events: (none)<br>
>> > Number Of Arrays: 0<br>
>> > Number Of Components: 0<br>
>> > Number Of Tuples: 0<br>
>> > Number Of Points: 9261<br>
>> > Number Of Cells: 8000<br>
>> > Cell Data:<br>
>> > Debug: Off<br>
>> > Modified Time: 204783<br>
>> > Reference Count: 1<br>
>> > Registered Events:<br>
>> > Registered Observers:<br>
>> > vtkObserver (0x4586550)<br>
>> > Event: 33<br>
>> > EventName: ModifiedEvent<br>
>> > Command: 0x45864a0<br>
>> > Priority: 0<br>
>> > Tag: 1<br>
>> > Number Of Arrays: 0<br>
>> > Number Of Components: 0<br>
>> > Number Of Tuples: 0<br>
>> > Copy Tuple Flags: ( 1 1 1 1 1 0 1 1 )<br>
>> > Interpolate Flags: ( 1 1 1 1 1 0 0 1 )<br>
>> > Pass Through Flags: ( 1 1 1 1 1 1 1 1 )<br>
>> > Scalars: (none)<br>
>> > Vectors: (none)<br>
>> > Normals: (none)<br>
>> > TCoords: (none)<br>
>> > Tensors: (none)<br>
>> > GlobalIds: (none)<br>
>> > PedigreeIds: (none)<br>
>> > EdgeFlag: (none)<br>
>> > Point Data:<br>
>> > Debug: Off<br>
>> > Modified Time: 204809<br>
>> > Reference Count: 1<br>
>> > Registered Events:<br>
>> > Registered Observers:<br>
>> > vtkObserver (0x45864f0)<br>
>> > Event: 33<br>
>> > EventName: ModifiedEvent<br>
>> > Command: 0x45864a0<br>
>> > Priority: 0<br>
>> > Tag: 1<br>
>> > Number Of Arrays: 1<br>
>> > Array 0 name = RTData<br>
>> > Number Of Components: 1<br>
>> > Number Of Tuples: 9261<br>
>> > Copy Tuple Flags: ( 1 1 1 1 1 0 1 1 )<br>
>> > Interpolate Flags: ( 1 1 1 1 1 0 0 1 )<br>
>> > Pass Through Flags: ( 1 1 1 1 1 1 1 1 )<br>
>> > Scalars:<br>
>> > Debug: Off<br>
>> > Modified Time: 204809<br>
>> > Reference Count: 2<br>
>> > Registered Events: (none)<br>
>> > Name: RTData<br>
>> > Data type: float<br>
>> > Size: 9261<br>
>> > MaxId: 9260<br>
>> > NumberOfComponents: 1<br>
>> > Information: 0<br>
>> > Name: RTData<br>
>> > Number Of Components: 1<br>
>> > Number Of Tuples: 9261<br>
>> > Size: 9261<br>
>> > MaxId: 9260<br>
>> > LookupTable: (none)<br>
>> > Vectors: (none)<br>
>> > Normals: (none)<br>
>> > TCoords: (none)<br>
>> > Tensors: (none)<br>
>> > GlobalIds: (none)<br>
>> > PedigreeIds: (none)<br>
>> > EdgeFlag: (none)<br>
>> > Bounds:<br>
>> > Xmin,Xmax: (-10, 10)<br>
>> > Ymin,Ymax: (-10, 10)<br>
>> > Zmin,Zmax: (-10, 10)<br>
>> > Compute Time: 204875<br>
>> > Spacing: (1, 1, 1)<br>
>> > Origin: (0, 0, 0)<br>
>> > Dimensions: (21, 21, 21)<br>
>> > Increments: (0, 0, 0)<br>
>> > Extent: (-10, 10, -10, 10, -10, 10)<br>
>> ><br>
>> ><br>
>> ><br>
>> > On Tue, Aug 15, 2017 at 2:27 PM, <<a href="mailto:u.utku.turuncoglu@be.itu.edu.tr" target="_blank">u.utku.turuncoglu@be.itu.edu.<wbr>tr</a>><br>
>> wrote:<br>
>> ><br>
>> >> Hi Andy,<br>
>> >><br>
>> >> Thanks for your help and the script. Actually, I was adding input<br>
>> names<br>
>> >> to<br>
>> >> the script by hand. Anyway, I tested your script and it gives similar<br>
>> >> error as follows,<br>
>> >><br>
>> >> File<br>
>> >> "/home/ext-dell-guest1/rds/hpc<wbr>-work/progs/paraview-5.3.0/<br>
>> >> egl/lib/site-packages/paraview<wbr>/coprocessing.py",<br>
>> >> line 305, in CreateProducer<br>
>> >> if grid.IsA("vtkImageData") == True or \<br>
>> >> AttributeError: 'NoneType' object has no attribute 'IsA'<br>
>> >> grid = adaptorinput.GetClientSideObje<wbr>ct().GetOutputDataObject(0)<br>
>> >> File<br>
>> >> "/home/ext-dell-guest1/rds/hpc<wbr>-work/progs/paraview-5.3.0/<br>
>> >> egl/lib/site-packages/paraview<wbr>/coprocessing.py",<br>
>> >> line 305, in CreateProducer<br>
>> >> if grid.IsA("vtkImageData") == True or \<br>
>> >> AttributeError: 'NoneType' object has no attribute 'IsA'<br>
>> >> grid = adaptorinput.GetClientSideObje<wbr>ct().GetOutputDataObject(0)<br>
>> >> File<br>
>> >> "/home/ext-dell-guest1/rds/hpc<wbr>-work/progs/paraview-5.3.0/<br>
>> >> egl/lib/site-packages/paraview<wbr>/coprocessing.py",<br>
>> >> line 305, in CreateProducer<br>
>> >> if grid.IsA("vtkImageData") == True or \<br>
>> >> AttributeError: 'NoneType' object has no attribute 'IsA'<br>
>> >><br>
>> >> I'll tested whole environment once again with Intel compiler to see<br>
>> it<br>
>> >> helps or not. Let me know if you have any other idea.<br>
>> >><br>
>> >> Regards,<br>
>> >><br>
>> >> --ufuk<br>
>> >><br>
>> >><br>
>> >> > Hi Ufuk,<br>
>> >> ><br>
>> >> > For the allinputsgridwriter.py you currently need to manually add<br>
>> in<br>
>> >> the<br>
>> >> > inputs yourself (i.e. replace the "namedinputs = ['input']" line<br>
>> with<br>
>> >> the<br>
>> >> > name of your inputs. That has caught me in the past as well so I<br>
>> >> decided<br>
>> >> > to<br>
>> >> > fix that. Attached is my new version of that script where it<br>
>> doesn't<br>
>> >> > require you to specify the input names in case you want to try this<br>
>> >> new<br>
>> >> > one<br>
>> >> > instead. If you do, please let us know if that solves your problem<br>
>> or<br>
>> >> not.<br>
>> >> ><br>
>> >> > Best,<br>
>> >> > Andy<br>
>> >> ><br>
>> >> ><br>
>> >> > On Tue, Aug 15, 2017 at 12:40 PM, Ben Boeckel<br>
>> >> <<a href="mailto:ben.boeckel@kitware.com" target="_blank">ben.boeckel@kitware.com</a>><br>
>> >> > wrote:<br>
>> >> ><br>
>> >> >> On Tue, Aug 15, 2017 at 17:59:47 +0300,<br>
>> >> <a href="mailto:u.utku.turuncoglu@be.itu.edu.tr" target="_blank">u.utku.turuncoglu@be.itu.edu.t<wbr>r</a><br>
>> >> >> wrote:<br>
>> >> >> > I solved the problem and i am able to run the simulation code<br>
>> with<br>
>> >> >> > Catalyst support by installing PV (5.4.0 rc4 and 5.3.0) with<br>
>> newer<br>
>> >> >> version<br>
>> >> >> > of protobuf library (3.3.0) and compiling the model code with<br>
>> this<br>
>> >> >> version<br>
>> >> >> > of PV (using gcc).<br>
>> >> >> ><br>
>> >> >> > Now, the problem is that the code gives following warnings and<br>
>> do<br>
>> >> >> nothing<br>
>> >> >> > with standard allinputsgridwriter.py script. Do you think that<br>
>> it<br>
>> >> is<br>
>> >> >> > related with protobuf library. The same setup is working without<br>
>> >> any<br>
>> >> >> > problem in an other system using Intel compiler.<br>
>> >> >><br>
>> >> >> It'd be better to try with one MPI process rather<br>
</div></div>>> than…I count<br>
<div class="m_8669203236763669705HOEnZb"><div class="m_8669203236763669705h5">>> >> 10 to<br>
>> >> >> get<br>
>> >> >> the error? Not sure what's up though, Andy?<br>
>> >> >><br>
>> >> >> > "/home/ext-dell-guest1/rds/hpc<wbr>-work/progs/paraview-5.3.0/egl<br>
>> >> >> /lib/site-packages/paraview/co<wbr>processing.py",<br>
>> >> >> > line 305, in CreateProducer<br>
>> >> >> > grid =<br>
>> >> adaptorinput.GetClientSideObje<wbr>ct().GetOutputDataObject(0)<br>
>> >> >> > grid =<br>
>> >> adaptorinput.GetClientSideObje<wbr>ct().GetOutputDataObject(0)<br>
>> >> >> > if grid.IsA("vtkImageData") == True or \<br>
>> >> >> > File<br>
>> >> >> > "/home/ext-dell-guest1/rds/hpc<wbr>-work/progs/paraview-5.3.0/egl<br>
>> >> >> /lib/site-packages/paraview/co<wbr>processing.py",<br>
>> >> >> > line 305, in CreateProducer<br>
>> >> >> > AttributeError: 'NoneType' object has no attribute 'IsA'<br>
>> >> >> > File<br>
>> >> >> > "/home/ext-dell-guest1/rds/hpc<wbr>-work/progs/paraview-5.3.0/egl<br>
>> >> >> /lib/site-packages/paraview/co<wbr>processing.py",<br>
>> >> >> > line 305, in CreateProducer<br>
>> >> >> > if grid.IsA("vtkImageData") == True or \<br>
>> >> >> > if grid.IsA("vtkImageData") == True or \<br>
>> >> >> > AttributeError: 'NoneType' object has no attribute 'IsA'<br>
>> >> >> > grid =<br>
>> >> adaptorinput.GetClientSideObje<wbr>ct().GetOutputDataObject(0)<br>
>> >> >> > File<br>
>> >> >> > "/home/ext-dell-guest1/rds/hpc<wbr>-work/progs/paraview-5.3.0/egl<br>
>> >> >> /lib/site-packages/paraview/co<wbr>processing.py",<br>
>> >> >> > line 305, in CreateProducer<br>
>> >> >> > grid =<br>
>> >> adaptorinput.GetClientSideObje<wbr>ct().GetOutputDataObject(0)<br>
>> >> >> > if grid.IsA("vtkImageData") == True or \<br>
>> >> >> > if grid.IsA("vtkImageData") == True or \<br>
>> >> >> > AttributeError: 'NoneType' object has no attribute 'IsA'<br>
>> >> >> > AttributeError: 'NoneType' object has no attribute 'IsA'<br>
>> >> >> > if grid.IsA("vtkImageData") == True or \<br>
>> >> >> > AttributeError: 'NoneType' object has no attribute 'IsA'<br>
>> >> >> > File<br>
>> >> >> > "/home/ext-dell-guest1/rds/hpc<wbr>-work/progs/paraview-5.3.0/egl<br>
>> >> >> /lib/site-packages/paraview/co<wbr>processing.py",<br>
>> >> >> > line 305, in CreateProducer<br>
>> >> >> > if grid.IsA("vtkImageData") == True or \<br>
>> >> >> > AttributeError: 'NoneType' object has no attribute 'IsA'<br>
>> >> >> > [PERFLOG] :: COPROC 2 0.01404021SEC.<br>
>> >> >> > Running COP Component: 2005-08-27T00:12:00 --><br>
>> 2005-08-27T00:18:00<br>
>> >> >> Time<br>
>> >> >> > Step: 2 [ 720.00]<br>
>> >> >> > ATM-TO-COP: redist mask [CROSS] to mask [CROSS]<br>
>> >> >> > ATM-TO-COP: redist topo [CROSS] to topo [CROSS]<br>
>> >> >> > AttributeError: 'NoneType' object has no attribute 'IsA'<br>
>> >> >> > grid =<br>
>> >> adaptorinput.GetClientSideObje<wbr>ct().GetOutputDataObject(0)<br>
>> >> >> > File<br>
>> >> >> > "/home/ext-dell-guest1/rds/hpc<wbr>-work/progs/paraview-5.3.0/egl<br>
>> >> >> /lib/site-packages/paraview/co<wbr>processing.py",<br>
>> >> >> > line 305, in CreateProducer<br>
>> >> >> > if grid.IsA("vtkImageData") == True or \<br>
>> >> >><br>
>> >> >> --Ben<br>
>> >> >><br>
>> >> ><br>
>> >><br>
>> >><br>
>> ><br>
>><br>
>><br>
>><br>
><br>
<br>
</div></div></blockquote></div><br></div></div></div>