[Paraview] using contour plot with xdmf input

Utkarsh Ayachit utkarsh.ayachit at kitware.com
Tue May 24 13:33:53 EDT 2016


Stephanie,

This is indeed weird, looks like I can apply the Contour filter but it
doesn't produce any output. Did you say you were writing out VTK files
before and it used to work then? Can you also share the VTK file that
was working?

Thanks
Utkarsh

On Tue, May 24, 2016 at 3:36 AM, Stephanie Wollherr
<wollherr at geophysik.uni-muenchen.de> wrote:
>
> Hi all,
>
>
> I'm using a xdmf input file to visualize my data output from a
> simulation. Before, the output format was vtk. I could easily do contour
> plots using
> CellDataToPointData and than apply the Contour button.
> However with the xdmf format this is no longer possible.
> There is no error but it just does not display anything.
>
> I came across this
> https://cmake.org/pipermail/paraview/2015-December/035852.html
> where another user run into this problem, but it seems that there was no
> answer on this.
>
> I was wondering if there is already a solution or if someone can help me
> with this?
> Thank you already in advance!
>
> Stephanie
>
> ps:
> I'm using paraview 4.3 on linux.
> My xdmf file looks like that:
> <?xml version="1.0" ?>
> <!DOCTYPE Xdmf SYSTEM "Xdmf.dtd" []>
> <Xdmf Version="2.0">
>  <Domain>
>   <Topology TopologyType="Triangle" NumberOfElements="147104">
>    <DataItem NumberType="Int" Precision="8" Format="HDF"
> Dimensions="147104 3">data-fault.h5:/connect</DataItem>
>   </Topology>
>   <Geometry name="geo" GeometryType="XYZ" NumberOfElements="441312">
>    <DataItem NumberType="Float" Precision="8" Format="HDF"
> Dimensions="441312 3">data-fault.h5:/geometry</DataItem>
>   </Geometry>
>   <DataItem NumberType="UInt" Precision="4" Format="HDF"
> Dimensions="147104">data-fault.h5:/partition</DataItem>
>   <DataItem NumberType="Float" Precision="8" Format="HDF"
> Dimensions="         133 147104">data-fault.h5:/SRs</DataItem>
>   <DataItem NumberType="Float" Precision="8" Format="HDF"
> Dimensions="         133 147104">data-fault.h5:/SRd</DataItem>
>   <DataItem NumberType="Float" Precision="8" Format="HDF"
> Dimensions="         133 147104">data-fault.h5:/T_s</DataItem>
>   <DataItem NumberType="Float" Precision="8" Format="HDF"
> Dimensions="         133 147104">data-fault.h5:/T_d</DataItem>
>   <DataItem NumberType="Float" Precision="8" Format="HDF"
> Dimensions="         133 147104">data-fault.h5:/P_n</DataItem>
>   <DataItem NumberType="Float" Precision="8" Format="HDF"
> Dimensions="         133 147104">data-fault.h5:/u_n</DataItem>
>   <DataItem NumberType="Float" Precision="8" Format="HDF"
> Dimensions="         133 147104">data-fault.h5:/Ts0</DataItem>
>   <DataItem NumberType="Float" Precision="8" Format="HDF"
> Dimensions="         133 147104">data-fault.h5:/Td0</DataItem>
>   <DataItem NumberType="Float" Precision="8" Format="HDF"
> Dimensions="         133 147104">data-fault.h5:/Pn0</DataItem>
>   <DataItem NumberType="Float" Precision="8" Format="HDF"
> Dimensions="         133 147104">data-fault.h5:/Sls</DataItem>
>   <DataItem NumberType="Float" Precision="8" Format="HDF"
> Dimensions="         133 147104">data-fault.h5:/Sld</DataItem>
>   <DataItem NumberType="Float" Precision="8" Format="HDF"
> Dimensions="         133 147104">data-fault.h5:/Vr</DataItem>
>   <DataItem NumberType="Float" Precision="8" Format="HDF"
> Dimensions="         133 147104">data-fault.h5:/ASl</DataItem>
>   <DataItem NumberType="Float" Precision="8" Format="HDF"
> Dimensions="         133 147104">data-fault.h5:/PSR</DataItem>
>   <Grid Name="TimeSeries" GridType="Collection" CollectionType="Temporal">
>    <Grid Name="step_000000000000" GridType="Uniform">
>     <Topology Reference="/Xdmf/Domain/Topology[1]"/>
>     <Geometry Reference="/Xdmf/Domain/Geometry[1]"/>
>     <Time Value="0.000608937"/>
>     <Attribute Name="partition" Center="Cell">
>      <DataItem Reference="/Xdmf/Domain/DataItem[1]" Dimensions="147104"/>
>     </Attribute>
>     <Attribute Name="SRs" Center="Cell">
>      <DataItem ItemType="HyperSlab" Dimensions="147104">
>       <DataItem NumberType="UInt" Precision="8" Format="XML"
> Dimensions="3 2">0 0 1 1 1 147104</DataItem>
>       <DataItem Reference="/Xdmf/Domain/DataItem[2]"/>
>      </DataItem>
>     </Attribute>
>     <Attribute Name="SRd" Center="Cell">
>      <DataItem ItemType="HyperSlab" Dimensions="147104">
>       <DataItem NumberType="UInt" Precision="8" Format="XML"
> Dimensions="3 2">0 0 1 1 1 147104</DataItem>
>       <DataItem Reference="/Xdmf/Domain/DataItem[3]"/>
>      </DataItem>
>     </Attribute>
>     <Attribute Name="T_s" Center="Cell">
>      <DataItem ItemType="HyperSlab" Dimensions="147104">
>       <DataItem NumberType="UInt" Precision="8" Format="XML"
> Dimensions="3 2">0 0 1 1 1 147104</DataItem>
>       <DataItem Reference="/Xdmf/Domain/DataItem[4]"/>
>      </DataItem>
>     </Attribute>
> .......
>
>
>
>
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