[Paraview] vtkHashSource-pv5.1 binary disappearing during ParaView 'make install'

Christopher Neal chrisneal at snumerics.com
Fri Aug 5 13:03:45 EDT 2016


I tried it again with cmake 3.5.1 and I see the same error.

-- Up-to-date: /home/neal/software/ParaView5.2/build/lib/cmake/paraview-5.1/Modules/vtkUtilitiesHashSource.cmake
CMake Error at VTK/Utilities/HashSource/cmake_install.cmake:46 (file):
  file INSTALL cannot find
  "/home/neal/software/ParaView5.2/build/bin/vtkHashSource-pv5.1".
Call Stack (most recent call first):
  VTK/cmake_install.cmake:148 (include)
  cmake_install.cmake:117 (include)

I did find a way around the issue by creating a ‘tempbin’ directory and copying the binaries into that directory and then making a symbolic link from the ‘bin’ to the binaries in the ‘tempbin’.

The code that the make install is failing on(VTK/Utilities/HashSource/cmake_install.cmake:46 ) has the following part that is leading to the error:

if(NOT CMAKE_INSTALL_COMPONENT OR "${CMAKE_INSTALL_COMPONENT}" STREQUAL "RuntimeLibraries")
  if(EXISTS "$ENV{DESTDIR}${CMAKE_INSTALL_PREFIX}/bin/vtkHashSource-pv5.1" AND
     NOT IS_SYMLINK "$ENV{DESTDIR}${CMAKE_INSTALL_PREFIX}/bin/vtkHashSource-pv5.1")
    file(RPATH_CHECK
         FILE "$ENV{DESTDIR}${CMAKE_INSTALL_PREFIX}/bin/vtkHashSource-pv5.1"
         RPATH "")
  endif()
  file(INSTALL DESTINATION "${CMAKE_INSTALL_PREFIX}/bin" TYPE EXECUTABLE FILES "/home/neal/software/ParaView5.2/build/bin/vtkHashSource-pv5.1")
  if(EXISTS "$ENV{DESTDIR}${CMAKE_INSTALL_PREFIX}/bin/vtkHashSource-pv5.1" AND
     NOT IS_SYMLINK "$ENV{DESTDIR}${CMAKE_INSTALL_PREFIX}/bin/vtkHashSource-pv5.1")
    file(RPATH_CHANGE
         FILE "$ENV{DESTDIR}${CMAKE_INSTALL_PREFIX}/bin/vtkHashSource-pv5.1"
         OLD_RPATH "/home/neal/software/ParaView5.2/build/lib:"
         NEW_RPATH "")
    if(CMAKE_INSTALL_DO_STRIP)
      execute_process(COMMAND "/usr/bin/strip" "$ENV{DESTDIR}${CMAKE_INSTALL_PREFIX}/bin/vtkHashSource-pv5.1")
    endif()
  endif()
endif()


There’s a if statement that checks to see if the executable is symbolic, and if it is it skips the following operation, which I believe is the source of my issue:

file(RPATH_CHANGE
         FILE "$ENV{DESTDIR}${CMAKE_INSTALL_PREFIX}/bin/vtkHashSource-pv5.1"
         OLD_RPATH "/home/neal/software/ParaView5.2/build/lib:"
         NEW_RPATH "")

-Chris


On 8/5/16, 11:40 AM, "ParaView on behalf of Christopher Neal" <paraview-bounces at paraview.org on behalf of chrisneal at snumerics.com> wrote:

    Thank you Utkarsh,
    
    I will try cmake 3.5.1 to see if that has any effect on the issue that I’m having.
    
    Output from: cmake –version
    cmake version 3.6.20160722-g8842a
    
    
    Output from: lsb_relase –a
    LSB Version:	n/a
    Distributor ID:	openSUSE project
    Description:	openSUSE 13.2 (Harlequin) (x86_64)
    Release:	13.2
    Codename:	Harlequin
    
    Thank you,
    -Chris
    
    
    On 8/4/16, 11:52 AM, "Utkarsh Ayachit" <utkarsh.ayachit at kitware.com> wrote:
    
        Sorry, no luck producing on Ubuntu 16.04 with CMake 3.5.1.
        
        On Thu, Aug 4, 2016 at 11:32 AM, Utkarsh Ayachit
        <utkarsh.ayachit at kitware.com> wrote:
        > That's odd. Trying to see if I can reproduce this with your command
        > line. I'll report back once the build is done.
        >
        > On Wed, Aug 3, 2016 at 4:22 PM, Christopher Neal
        > <chrisneal at snumerics.com> wrote:
        >> Hi All,
        >>
        >>
        >>
        >> I’m seeing something strange when I try to compile ParaView 5.1 from the
        >> source. I execute the following commands to compile ParaView:
        >>
        >>
        >>
        >> git clone https://github.com/Kitware/ParaView.git
        >>
        >> *Go into cloned ParaView directory*
        >>
        >> git submodule init
        >>
        >> git submodule update
        >>
        >> mkdir ParaView_build  *not inside the ParaView source directory, somewhere
        >> else*
        >>
        >> cd ParaView_build
        >>
        >>
        >>
        >> cmake -DCMAKE_BUILD_TYPE:STRING=Release -DCMAKE_SKIP_INSTALL_RPATH:BOOL=YES
        >> -DBUILD_TESTING:BOOL=OFF -DPARAVIEW_BUILD_QT_GUI:BOOL=OFF
        >> -DVTK_RENDERING_BACKEND=OpenGL2 -DPARAVIEW_USE_MPI:BOOL=ON
        >> -DPARAVIEW_ENABLE_PYTHON:BOOL=ON
        >> -DPARAVIEW_INSTALL_DEVELOPMENT_FILES:BOOL=ON
        >> -DPARAVIEW_BUILD_CATALYST_ADAPTERS:BOOL=ON
        >> -DPARAVIEW_BUILD_PLUGIN_AnalyzeNIfTIIO:BOOL=FALSE
        >> -DPARAVIEW_BUILD_PLUGIN_ArrowGlyph:BOOL=FALSE
        >> -DPARAVIEW_BUILD_PLUGIN_CDIReader:BOOL=FALSE
        >> -DPARAVIEW_BUILD_PLUGIN_EyeDomeLighting:BOOL=FALSE
        >> -DPARAVIEW_BUILD_PLUGIN_GMVReader:BOOL=FALSE
        >> -DPARAVIEW_BUILD_PLUGIN_GeodesicMeasurement:BOOL=FALSE
        >> -DPARAVIEW_BUILD_PLUGIN_H5PartReader:BOOL=FALSE
        >> -DPARAVIEW_BUILD_PLUGIN_InSituExodus:BOOL=FALSE
        >> -DPARAVIEW_BUILD_PLUGIN_MantaView:BOOL=FALSE
        >> -DPARAVIEW_BUILD_PLUGIN_Moments:BOOL=FALSE
        >> -DPARAVIEW_BUILD_PLUGIN_NonOrthogonalSource:BOOL=FALSE
        >> -DPARAVIEW_BUILD_PLUGIN_PacMan:BOOL=FALSE
        >> -DPARAVIEW_BUILD_PLUGIN_PointSprite:BOOL=FALSE
        >> -DPARAVIEW_BUILD_PLUGIN_RGBZView:BOOL=FALSE
        >> -DPARAVIEW_BUILD_PLUGIN_SLACTools:BOOL=FALSE
        >> -DPARAVIEW_BUILD_PLUGIN_SciberQuestToolKit:BOOL=FALSE
        >> -DPARAVIEW_BUILD_PLUGIN_SierraPlotTools:BOOL=FALSE
        >> -DPARAVIEW_BUILD_PLUGIN_StreamingParticles:BOOL=FALSE
        >> -DPARAVIEW_BUILD_PLUGIN_SurfaceLIC:BOOL=FALSE
        >> -DPARAVIEW_BUILD_PLUGIN_ThickenLayeredCells:BOOL=FALSE
        >> -DPARAVIEW_BUILD_PLUGIN_UncertaintyRendering:BOOL=FALSE
        >> -DPARAVIEW_BUILD_PLUGIN_AcceleratedAlgorithms:BOOL=OFF
        >> -DVTK_USE_CXX11_FEATURES:BOOL=ON
        >> -DCMAKE_INSTALL_PREFIX=/home/neal/software/ParaView_build
        >> /home/neal/software/ParaView
        >>
        >>
        >>
        >> (note the last 2 items are paths to the build directory and the source,
        >> respectively)
        >>
        >>
        >>
        >> make
        >>
        >> make install
        >>
        >>
        >>
        >> Everything up to ‘make’ looks to work just fine. Now, there is a file called
        >> ‘vtkHashSource-pv5.1’ that is located in the /bin directory of the ParaView
        >> build. When I type ‘make install’, I get the following error:
        >>
        >>
        >>
        >> CMake Error at VTK/Utilities/HashSource/cmake_install.cmake:46 (file):
        >>
        >>   file INSTALL cannot find
        >>
        >>
        >> "/home/neal/software/Catalyst/Catalyst-v5.1.0-Base-Enable-Python-Essentials_build/bin/vtkHashSource-pv5.1".
        >>
        >> Call Stack (most recent call first):
        >>
        >>   VTK/cmake_install.cmake:420 (include)
        >>
        >>   cmake_install.cmake:117 (include)
        >>
        >>
        >>
        >> Makefile:94: recipe for target 'install' failed
        >>
        >> make: *** [install] Error 1
        >>
        >>
        >>
        >>
        >>
        >> I looked and it has moved or deleted the ‘vtkHashSource-pv5.1’ file that was
        >> originally in the ParaView/bin directory! I’m sure of it because I copied
        >> the file to a temp directory and it disappears every time I put it in the
        >> ParaView/bin and type ‘make install’.
        >>
        >> Has anyone had this problem?
        >>
        >> Thank you,
        >>
        >> Chris Neal
        >>
        >>
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