[Paraview] display bonds between atoms using paraview

David Lonie david.lonie at kitware.com
Fri Oct 4 14:37:34 EDT 2013


On Thu, Oct 3, 2013 at 5:10 PM, Jian Luo <laurenjasonbh at gmail.com> wrote:

> Hi everyone,
>
> I am in the field of atomic simulation.
> Paraview can display atoms beautifully, but I currently cannot find a way
> to draw bonds between atoms within certain distance.
> Can anyone help me with this? Thanks very much.
>

As far as I know, ParaView is only able to visualize molecular data, and
does not include such editing capabilities. I'd recommend using software
like Avogadro[1] to modify the molecule, which can then be saved as .cml
and displayed in ParaView if desired.

Hope this helps,
Dave

[1] http://avogadro.openmolecules.net
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