[Paraview] Problem Building Paraview-3.8.0 with MPICH

Lokendra Singh lsingh.969 at gmail.com
Tue Sep 7 10:39:53 EDT 2010


Hi Dave,

Thanks for the quick reply.

I tried your suggestion but it didnt work :(

Regards
Lokendra

On Tue, Sep 7, 2010 at 7:53 PM, Dave Partyka <dave.partyka at kitware.com>wrote:

> Hi Lokendra,
>
> I am not sure if this helps but you should just set MPI_LIBRARY=
> /usr/lib64/libmpich.so
>
> On Tue, Sep 7, 2010 at 10:16 AM, Lokendra Singh <lsingh.969 at gmail.com>wrote:
>
>> Hi All,
>>
>> I am facing following error when building paraview-3.8.0 with
>> MPICH1-1.2.5.2 (sorry, but I cant upgrade the MPICH because of some
>> limitations on the remote cluster).
>> Strange thing is these undefined functions like 'PMPI_Info_set' are
>> declared in the header files in the variable MPI_INCLUDE_PATH which contain
>> mpi.h, mpif.h, mpio.h etc, hence I assume that the definitions must be
>> present in libraries.
>>
>> My MPI_LIBRARY=/usr/lib64/libmpich.so.1.0
>> and MPI_EXTRA_LIBRARY=/usr/lib64/libmpich.so (obtained from dev version of
>> mpich)
>>
>> Has anybody faced a similar problem.
>>
>> ERROR:
>> /usr/lib/gcc/x86_64-manbo-linux-gnu/4.3.2/../../../../lib64/libmpich.so:
>> undefined reference to `PMPI_Info_set'
>> /usr/lib/gcc/x86_64-manbo-linux-gnu/4.3.2/../../../../lib64/libmpich.so:
>> undefined reference to `PMPI_Attr_get'
>> /usr/lib/gcc/x86_64-manbo-linux-gnu/4.3.2/../../../../lib64/libmpich.so:
>> undefined reference to `PMPI_Wtime'
>> /usr/lib/gcc/x86_64-manbo-linux-gnu/4.3.2/../../../../lib64/libmpich.so:
>> undefined reference to `PMPI_Comm_rank'
>> /usr/lib/gcc/x86_64-manbo-linux-gnu/4.3.2/../../../../lib64/libmpich.so:
>> undefined reference to `PMPI_Abort'
>> /usr/lib/gcc/x86_64-manbo-linux-gnu/4.3.2/../../../../lib64/libmpich.so:
>> undefined reference to `PMPI_Get_elements'
>> /usr/lib/gcc/x86_64-manbo-linux-gnu/4.3.2/../../../../lib64/libmpich.so:
>> undefined reference to `PMPI_Type_commit'
>> /usr/lib/gcc/x86_64-manbo-linux-gnu/4.3.2/../../../../lib64/libmpich.so:
>> undefined reference to `PMPI_Isend'
>> /usr/lib/gcc/x86_64-manbo-linux-gnu/4.3.2/../../../../lib64/libmpich.so:
>> undefined reference to `PMPI_Info_free'
>> /usr/lib/gcc/x86_64-manbo-linux-gnu/4.3.2/../../../../lib64/libmpich.so:
>> undefined reference to `PMPI_Barrier'
>> /usr/lib/gcc/x86_64-manbo-linux-gnu/4.3.2/../../../../lib64/libmpich.so:
>> undefined reference to `PMPI_Waitall'
>> /usr/lib/gcc/x86_64-manbo-linux-gnu/4.3.2/../../../../lib64/libmpich.so:
>> undefined reference to `PMPI_Gatherv'
>> /usr/lib/gcc/x86_64-manbo-linux-gnu/4.3.2/../../../../lib64/libmpich.so:
>> undefined reference to `PMPI_Irecv'
>> /usr/lib/gcc/x86_64-manbo-linux-gnu/4.3.2/../../../../lib64/libmpich.so:
>> undefined reference to `PMPI_Allgather'
>> /usr/lib/gcc/x86_64-manbo-linux-gnu/4.3.2/../../../../lib64/libmpich.so:
>> undefined reference to `PMPI_Info_delete'
>> /usr/lib/gcc/x86_64-manbo-linux-gnu/4.3.2/../../../../lib64/libmpich.so:
>> undefined reference to `PMPI_Type_hindexed'
>> /usr/lib/gcc/x86_64-manbo-linux-gnu/4.3.2/../../../../lib64/libmpich.so:
>> undefined reference to `PMPI_Type_size'
>> /usr/lib/gcc/x86_64-manbo-linux-gnu/4.3.2/../../../../lib64/libmpich.so:
>> undefined reference to `PMPI_Comm_test_inter'
>> /usr/lib/gcc/x86_64-manbo-linux-gnu/4.3.2/../../../../lib64/libmpich.so:
>> undefined reference to `PMPI_Type_get_envelope'
>> /usr/lib/gcc/x86_64-manbo-linux-gnu/4.3.2/../../../../lib64/libmpich.so:
>> undefined reference to `PMPI_Gather'
>> /usr/lib/gcc/x86_64-manbo-linux-gnu/4.3.2/../../../../lib64/libmpich.so:
>> undefined reference to `PMPI_Type_extent'
>> /usr/lib/gcc/x86_64-manbo-linux-gnu/4.3.2/../../../../lib64/libmpich.so:
>> undefined reference to `PMPI_Get_processor_name'
>> /usr/lib/gcc/x86_64-manbo-linux-gnu/4.3.2/../../../../lib64/libmpich.so:
>> undefined reference to `PMPI_Bcast'
>> /usr/lib/gcc/x86_64-manbo-linux-gnu/4.3.2/../../../../lib64/libmpich.so:
>> undefined reference to `PMPI_Initialized'
>> /usr/lib/gcc/x86_64-manbo-linux-gnu/4.3.2/../../../../lib64/libmpich.so:
>> undefined reference to `PMPI_Allreduce'
>> /usr/lib/gcc/x86_64-manbo-linux-gnu/4.3.2/../../../../lib64/libmpich.so:
>> undefined reference to `PMPI_Sendrecv'
>> /usr/lib/gcc/x86_64-manbo-linux-gnu/4.3.2/../../../../lib64/libmpich.so:
>> undefined reference to `PMPI_Type_contiguous'
>> /usr/lib/gcc/x86_64-manbo-linux-gnu/4.3.2/../../../../lib64/libmpich.so:
>> undefined reference to `PMPI_Info_create'
>> /usr/lib/gcc/x86_64-manbo-linux-gnu/4.3.2/../../../../lib64/libmpich.so:
>> undefined reference to `PMPI_Type_lb'
>> /usr/lib/gcc/x86_64-manbo-linux-gnu/4.3.2/../../../../lib64/libmpich.so:
>> undefined reference to `PMPI_Keyval_create'
>> /usr/lib/gcc/x86_64-manbo-linux-gnu/4.3.2/../../../../lib64/libmpich.so:
>> undefined reference to `PMPI_Address'
>> /usr/lib/gcc/x86_64-manbo-linux-gnu/4.3.2/../../../../lib64/libmpich.so:
>> undefined reference to `PMPI_Attr_put'
>> /usr/lib/gcc/x86_64-manbo-linux-gnu/4.3.2/../../../../lib64/libmpich.so:
>> undefined reference to `PMPI_Comm_group'
>> /usr/lib/gcc/x86_64-manbo-linux-gnu/4.3.2/../../../../lib64/libmpich.so:
>> undefined reference to `PMPI_Comm_dup'
>> /usr/lib/gcc/x86_64-manbo-linux-gnu/4.3.2/../../../../lib64/libmpich.so:
>> undefined reference to `PMPI_Comm_free'
>> /usr/lib/gcc/x86_64-manbo-linux-gnu/4.3.2/../../../../lib64/libmpich.so:
>> undefined reference to `PMPI_Info_get'
>> /usr/lib/gcc/x86_64-manbo-linux-gnu/4.3.2/../../../../lib64/libmpich.so:
>> undefined reference to `PMPI_Alltoall'
>> /usr/lib/gcc/x86_64-manbo-linux-gnu/4.3.2/../../../../lib64/libmpich.so:
>> undefined reference to `PMPI_Comm_size'
>> /usr/lib/gcc/x86_64-manbo-linux-gnu/4.3.2/../../../../lib64/libmpich.so:
>> undefined reference to `PMPI_Info_dup'
>> /usr/lib/gcc/x86_64-manbo-linux-gnu/4.3.2/../../../../lib64/libmpich.so:
>> undefined reference to `PMPI_Type_free'
>> /usr/lib/gcc/x86_64-manbo-linux-gnu/4.3.2/../../../../lib64/libmpich.so:
>> undefined reference to `PMPI_Error_string'
>> /usr/lib/gcc/x86_64-manbo-linux-gnu/4.3.2/../../../../lib64/libmpich.so:
>> undefined reference to `PMPI_Type_get_contents'
>> /usr/lib/gcc/x86_64-manbo-linux-gnu/4.3.2/../../../../lib64/libmpich.so:
>> undefined reference to `PMPI_Testall'
>>
>> Regards
>> Lokendra
>>
>>
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