From vishwak at miamioh.edu  Thu Jun 22 09:13:34 2017
From: vishwak at miamioh.edu (Vishwanath, Karthik)
Date: Thu, 22 Jun 2017 09:13:34 -0400
Subject: [Nirfast] linked library issues on NIRFASTSlicer (linux)
Message-ID: <CAKSWhRLE5L6yoA_GcYjjWPOivq4HPPM1G7oW2ihAy1guuPHoHw@mail.gmail.com>

Hi All,

I downloaded the NIRFASTSlicer (NIRFASTSlicer-1.0.1-linux-amd64.tar.gz)
from https://packages.kitware.com/packages/application/view?applicationId=22

Trying to run the executable gives 164 errors, all similar to the form
below:

/home/karthik/Research/Matlab/lib/nirfast/NIRFASTSlicer-1.0.
1-linux-amd64/./bin/NIRFASTSlicerApp-real:
/usr/lib/x86_64-linux-gnu/libstdc++.so.6:
version `GLIBCXX_3.4.21' not found (required by
/home/karthik/Research/Matlab/lib/nirfast/NIRFASTSlicer-1.0.
1-linux-amd64/./bin/NIRFASTSlicerApp-real)

My system is a standard Ubuntu trusty 14.04,
glibc version (via ldd --version) = Ubuntu EGLIBC 2.19-0ubuntu6.13) 2.19
kernel: (uname -r)  = 3.13.0-107-generic

Any help on fixing this will be much appreciated.


Thanks!

--
Karthik Vishwanath
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From alexis.girault at kitware.com  Thu Jun 22 09:53:19 2017
From: alexis.girault at kitware.com (Alexis Girault)
Date: Thu, 22 Jun 2017 09:53:19 -0400
Subject: [Nirfast] linked library issues on NIRFASTSlicer (linux)
In-Reply-To: <CAKSWhRLE5L6yoA_GcYjjWPOivq4HPPM1G7oW2ihAy1guuPHoHw@mail.gmail.com>
References: <CAKSWhRLE5L6yoA_GcYjjWPOivq4HPPM1G7oW2ihAy1guuPHoHw@mail.gmail.com>
Message-ID: <CAG1Y6mAj2ygKUkV1mtfhBMYQzSJwH4+M0WoUSz=G+6a6wo6VCA@mail.gmail.com>

Hello Karthik,

Thanks for contacting us, sorry to see you're having issues running
NIRFASTSlicer.

Could you run the following command in your terminal and give us the result?

strings /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | grep GLIBCXX


if `GLIBCXX_3.4.21` does not appear, it means that your GCC version is not
up to date on your Ubuntu system (is it old?), in which case the following
line should fix it:

sudo apt-get install libstdc++6


To ensure that it worked, check that the first command shows `GLIBCXX_3.4.21`
this time. If it still doesn't work, you could try:

sudo add-apt-repository ppa:ubuntu-toolchain-r/test

sudo apt-get update

sudo apt-get upgrade


You might have to reboot afterwards before running the application.

Let us know if that works,

Best,




Alexis Girault
R&D Engineer in Medical Computing
Kitware, Inc.

http://www.kitware.com
(919) 969-6990 x325

On Thu, Jun 22, 2017 at 9:13 AM, Vishwanath, Karthik <vishwak at miamioh.edu>
wrote:

> Hi All,
>
> I downloaded the NIRFASTSlicer (NIRFASTSlicer-1.0.1-linux-amd64.tar.gz)
> from https://packages.kitware.com/packages/application/view?appli
> cationId=22
>
> Trying to run the executable gives 164 errors, all similar to the form
> below:
>
> /home/karthik/Research/Matlab/lib/nirfast/NIRFASTSlicer-1.0.
> 1-linux-amd64/./bin/NIRFASTSlicerApp-real: /usr/lib/x86_64-linux-gnu/libstdc++.so.6:
> version `GLIBCXX_3.4.21' not found (required by
> /home/karthik/Research/Matlab/lib/nirfast/NIRFASTSlicer-1.0.
> 1-linux-amd64/./bin/NIRFASTSlicerApp-real)
>
> My system is a standard Ubuntu trusty 14.04,
> glibc version (via ldd --version) = Ubuntu EGLIBC 2.19-0ubuntu6.13) 2.19
> kernel: (uname -r)  = 3.13.0-107-generic
>
> Any help on fixing this will be much appreciated.
>
>
> Thanks!
>
> --
> Karthik Vishwanath
>
> _______________________________________________
> Nirfast mailing list
> Nirfast at public.kitware.com
> http://public.kitware.com/mailman/listinfo/nirfast
>
>
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