<div dir="ltr"><div class="gmail_default" style="font-family:verdana,sans-serif;font-size:small">Hi Tomáš,</div><div class="gmail_default" style="font-family:verdana,sans-serif;font-size:small"><br></div><div class="gmail_default" style="font-family:verdana,sans-serif;font-size:small">if you are looking at slice thickness tag and seeing that it is only 1.25 mm, while the distances between slices are 2.5 mm, do not worry. Similar thing is common in practice, although your case is a bit more extreme. But ITK should read that series normally, and do some kind of interpolation during registration (linear is usual). You shouldn't need to do anything special.</div><div class="gmail_default" style="font-family:verdana,sans-serif;font-size:small"><br></div><div class="gmail_default" style="font-family:verdana,sans-serif;font-size:small">Regards,</div><div class="gmail_default" style="font-family:verdana,sans-serif;font-size:small">Dženan</div></div><div class="gmail_extra"><br><div class="gmail_quote">On Thu, Mar 30, 2017 at 10:33 AM, topsorn <span dir="ltr"><<a href="mailto:tomas.psorn@gmail.com" target="_blank">tomas.psorn@gmail.com</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">Hello,<br>
<br>
I'm dealing with a registration problem. I'm supposed to perform 3D<br>
registration of rat brain MRI scans. The problem is, that my dataset has<br>
gaps in "z" direction. That means I have dataset of 15, 1.25 mm thick slices<br>
and between them 14, 1.25 mm thick gaps. Is there a way of interpolating the<br>
missing slices using ITK? Thank you for an answer.<br>
<br>
Tomáš Pšorn<br>
<br>
<br>
<br>
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