<div dir="ltr"><div class="gmail_default" style="font-family:verdana,sans-serif;font-size:small">Hi Constance,</div><div class="gmail_default" style="font-family:verdana,sans-serif;font-size:small"><br></div><div class="gmail_default" style="font-family:verdana,sans-serif;font-size:small">building it outside of ITK I also get similar errors, e.g.:</div><div class="gmail_default" style="font-size:small"><div class="gmail_default"><font face="monospace, monospace">5>C:\Misc\LesionSizingToolkit\Utilities\Visualization\IsoSurfaceVolumeEstimation.cxx(21): fatal error C1083: Cannot open include file: 'vtkPolyDataWriter.h': No such file or directory</font></div><div style="font-family:verdana,sans-serif"><br></div><div style="font-family:verdana,sans-serif">I will investigate later, and in the meantime you can try building it as part of ITK (turn Module_LesionSizingToolkit ON).</div><div style="font-family:verdana,sans-serif"><br></div><div style="font-family:verdana,sans-serif">Regards,</div><div style="font-family:verdana,sans-serif">Dženan</div></div></div><div class="gmail_extra"><br><div class="gmail_quote">On Thu, Oct 13, 2016 at 11:20 AM, Dženan Zukić <span dir="ltr"><<a href="mailto:dzenanz@gmail.com" target="_blank">dzenanz@gmail.com</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr"><div class="gmail_default" style="font-family:verdana,sans-serif;font-size:small">Hi Constance,</div><div class="gmail_default" style="font-family:verdana,sans-serif;font-size:small"><br></div><div class="gmail_default" style="font-family:verdana,sans-serif;font-size:small">the lesion sizing toolkit builds with master version of ITK with examples and tests turned off. I will now try building with those on to see if some problems appear. I used VS2013 x64.</div><div class="gmail_default" style="font-family:verdana,sans-serif;font-size:small"><br></div><div class="gmail_default" style="font-family:verdana,sans-serif;font-size:small">Regards,</div><div class="gmail_default" style="font-family:verdana,sans-serif;font-size:small">Dženan</div></div><div class="gmail_extra"><br><div class="gmail_quote"><div><div class="h5">On Thu, Oct 13, 2016 at 10:48 AM, Owens,Constance A <span dir="ltr"><<a href="mailto:CAOwens@mdanderson.org" target="_blank">CAOwens@mdanderson.org</a>></span> wrote:<br></div></div><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div><div class="h5">
<div lang="EN-US" link="#0563C1" vlink="#954F72">
<div class="m_7087455932712573157m_5168399935580068930WordSection1">
<p class="MsoNormal">I was hoping to speak with someone who may be able to help me with installing and building Lesion Sizing Toolkit. Originally I tried to build LSTK with ITK v4.2.0 and VTK v7.0.0 but during the build process (I’m using Visual Studio 9 2008
64x), 6 projects fail with the following errors:<u></u><u></u></p>
<p class="MsoNormal"><u></u> <u></u></p>
<p class="MsoNormal">Error 1 fatal error C1083: Cannot open include file: 'itkLesionSegmentationImageFil<wbr>ter8.h': No such file or directory c:\itk2\src\modules\remote\les<wbr>ionsizingtoolkit\examples\itkL<wbr>esionSegmentationCommandLinePr<wbr>ogressReporter.h <wbr>
22<u></u><u></u></p>
<p class="MsoNormal">Error 2 fatal error C1083: Cannot open include file: 'itkImageFileReader.h': No such file or directory c:\ITK2\src\Modules\Remote\Les<wbr>ionSizingToolkit\Examples\Lesi<wbr>onSegmentation.cxx 1<u></u><u></u></p>
<p class="MsoNormal">Error 3 fatal error C1083: Cannot open include file: 'itkVector.h': No such file or directory c:\itk2\src\modules\remote\les<wbr>ionsizingtoolkit\utilities\vis<wbr>ualization\vtkContourVisualiza<wbr>tionModule.h
22<u></u><u></u></p>
<p class="MsoNormal">Error 4 fatal error C1083: Cannot open include file: 'vtkPolyDataWriter.h': No such file or directory c:\ITK2\src\Modules\Remote\Les<wbr>ionSizingToolkit\Utilities\Vis<wbr>ualization\LesionSurfaceExtrac<wbr>tion.cxx
21<u></u><u></u></p>
<p class="MsoNormal">Error 5 fatal error C1083: Cannot open include file: 'vtkPolyDataWriter.h': No such file or directory c:\ITK2\src\Modules\Remote\Les<wbr>ionSizingToolkit\Utilities\Vis<wbr>ualization\IsoSurfaceVolumeEst<wbr>imation.cxx
21<u></u><u></u></p>
<p class="MsoNormal">Error 6 fatal error C1083: Cannot open include file: 'itkVector.h': No such file or directory c:\itk2\src\modules\remote\les<wbr>ionsizingtoolkit\utilities\vis<wbr>ualization\vtkContourVisualiza<wbr>tionModule.h
22<u></u><u></u></p>
<p class="MsoNormal">Error 7 fatal error C1083: Cannot open include file: 'itkCommand.h': No such file or directory c:\ITK2\src\Modules\Remote\Les<wbr>ionSizingToolkit\Utilities\Vis<wbr>ualization\ViewImageAndSegment<wbr>ationSurface.cxx <wbr>
18<u></u><u></u></p>
<p class="MsoNormal">Error 8 error C2039: 'MetaEvent' : is not a member of '`global namespace'' c:\itk2\src\modules\core\spati<wbr>alobjects\include\itkMetaEvent<wbr>.h 35<u></u><u></u></p>
<p class="MsoNormal">Error 9 error C2499: 'itk::MetaEvent' : a class cannot be its own base class c:\itk2\src\modules\core\spati<wbr>alobjects\include\itkMetaEvent<wbr>.h 35<u></u><u></u></p>
<p class="MsoNormal">Error 10 error C2146: syntax error : missing ';' before identifier 'MetaObjectType' <wbr> c:\itk2\src\modules\core\spati<wbr>alobjects\include\itkMetaConve<wbr>rterBase.h 55<u></u><u></u></p>
<p class="MsoNormal">Error 11 error C4430: missing type specifier - int assumed. Note: C++ does not support default-int c:\itk2\src\modules\core\spati<wbr>alobjects\include\itkMetaConve<wbr>rterBase.h 55<u></u><u></u></p>
<p class="MsoNormal">Error 12 error C4430: missing type specifier - int assumed. Note: C++ does not support default-int c:\itk2\src\modules\core\spati<wbr>alobjects\include\itkMetaConve<wbr>rterBase.h 55<u></u><u></u></p>
<p class="MsoNormal">Error 13 error C4430: missing type specifier - int assumed. Note: C++ does not support default-int c:\itk2\src\modules\core\spati<wbr>alobjects\include\itkMetaConve<wbr>rterBase.h 64<u></u><u></u></p>
<p class="MsoNormal">Error 14 error C2143: syntax error : missing ',' before '*' c:\itk2\src\modules\core\spati<wbr>alobjects\include\itkMetaConve<wbr>rterBase.h 64<u></u><u></u></p>
<p class="MsoNormal">Error 15 error C2143: syntax error : missing ';' before '*' c:\itk2\src\modules\core\spati<wbr>alobjects\include\itkMetaConve<wbr>rterBase.h 67<u></u><u></u></p>
<p class="MsoNormal">Error 16 error C2433: 'itk::MetaConverterBase<VDimen<wbr>sion>::MetaObjectType' : 'virtual' not permitted on data declarations c:\itk2\src\modules\core\spati<wbr>alobjects\include\itkMetaConve<wbr>rterBase.h 67<u></u><u></u></p>
<p class="MsoNormal">Error 17 error C4430: missing type specifier - int assumed. Note: C++ does not support default-int c:\itk2\src\modules\core\spati<wbr>alobjects\include\itkMetaConve<wbr>rterBase.h 67<u></u><u></u></p>
<p class="MsoNormal">Error 18 error C4430: missing type specifier - int assumed. Note: C++ does not support default-int c:\itk2\src\modules\core\spati<wbr>alobjects\include\itkMetaConve<wbr>rterBase.h 67<u></u><u></u></p>
<p class="MsoNormal">Error 20 error C2143: syntax error : missing ';' before '*' c:\itk2\src\modules\core\spati<wbr>alobjects\include\itkMetaConve<wbr>rterBase.h 77<u></u><u></u></p>
<p class="MsoNormal">Error 21 error C2433: 'itk::MetaConverterBase<VDimen<wbr>sion>::MetaObjectType' : 'virtual' not permitted on data declarations c:\itk2\src\modules\core\spati<wbr>alobjects\include\itkMetaConve<wbr>rterBase.h 77<u></u><u></u></p>
<p class="MsoNormal">Error 22 error C4430: missing type specifier - int assumed. Note: C++ does not support default-int c:\itk2\src\modules\core\spati<wbr>alobjects\include\itkMetaConve<wbr>rterBase.h 77<u></u><u></u></p>
<p class="MsoNormal">Error 23 error C4430: missing type specifier - int assumed. Note: C++ does not support default-int c:\itk2\src\modules\core\spati<wbr>alobjects\include\itkMetaConve<wbr>rterBase.h 77<u></u><u></u></p>
<p class="MsoNormal">Error 25 error C2143: syntax error : missing ';' before '*' C:\ITK2\src\Modules\Core\Spati<wbr>alObjects\include\itkMetaScene<wbr>Converter.h 100<u></u><u></u></p>
<p class="MsoNormal">Error 26 error C4430: missing type specifier - int assumed. Note: C++ does not support default-int C:\ITK2\src\Modules\Core\Spati<wbr>alObjects\include\itkMetaScene<wbr>Converter.h 100<u></u><u></u></p>
<p class="MsoNormal">Error 27 error C4430: missing type specifier - int assumed. Note: C++ does not support default-int C:\ITK2\src\Modules\Core\Spati<wbr>alObjects\include\itkMetaScene<wbr>Converter.h 102<u></u><u></u></p>
<p class="MsoNormal">Error 29 error C2061: syntax error : identifier 'MetaScene' C:\ITK2\src\Modules\Core\Spati<wbr>alObjects\include\itkMetaScene<wbr>Converter.h 104<u></u><u></u></p>
<p class="MsoNormal">Error 30 error C2065: 'MetaObject' : undeclared identifier C:\ITK2\src\Modules\Core\Spati<wbr>alObjects\include\itkMetaScene<wbr>Converter.h 112<u></u><u></u></p>
<p class="MsoNormal">Error 31 error C2059: syntax error : '>' C:\ITK2\src\Modules\Core\Spati<wbr>alObjects\include\itkMetaScene<wbr>Converter.h 112<u></u><u></u></p>
<p class="MsoNormal">Error 32 error C2143: syntax error : missing ';' before '{' C:\ITK2\src\Modules\Core\Spati<wbr>alObjects\include\itkMetaScene<wbr>Converter.h 116<u></u><u></u></p>
<p class="MsoNormal">Error 33 error C2653: 'TConverter' : is not a class or namespace name C:\ITK2\src\Modules\Core\Spati<wbr>alObjects\include\itkMetaScene<wbr>Converter.h 117<u></u><u></u></p>
<p class="MsoNormal">Error 34 error C2653: 'TConverter' : is not a class or namespace name C:\ITK2\src\Modules\Core\Spati<wbr>alObjects\include\itkMetaScene<wbr>Converter.h 117<u></u><u></u></p>
<p class="MsoNormal">Error 35 error C2143: syntax error : missing ';' before '}' C:\ITK2\src\Modules\Core\Spati<wbr>alObjects\include\itkMetaScene<wbr>Converter.h 121<u></u><u></u></p>
<p class="MsoNormal">Error 36 error C2143: syntax error : missing ';' before '{' C:\ITK2\src\Modules\Core\Spati<wbr>alObjects\include\itkMetaScene<wbr>Converter.h 124<u></u><u></u></p>
<p class="MsoNormal">Error 37 error C2653: 'TConverter' : is not a class or namespace name C:\ITK2\src\Modules\Core\Spati<wbr>alObjects\include\itkMetaScene<wbr>Converter.h 125<u></u><u></u></p>
<p class="MsoNormal">Error 38 error C2653: 'TConverter' : is not a class or namespace name C:\ITK2\src\Modules\Core\Spati<wbr>alObjects\include\itkMetaScene<wbr>Converter.h 125<u></u><u></u></p>
<p class="MsoNormal">Error 39 error C2143: syntax error : missing ';' before '}' C:\ITK2\src\Modules\Core\Spati<wbr>alObjects\include\itkMetaScene<wbr>Converter.h 127<u></u><u></u></p>
<p class="MsoNormal">Error 40 error C2065: 'transform' : undeclared identifier C:\ITK2\src\Modules\Core\Spati<wbr>alObjects\include\itkMetaScene<wbr>Converter.h 128<u></u><u></u></p>
<p class="MsoNormal">Error 41 error C2143: syntax error : missing ',' before ')' C:\ITK2\src\Modules\Core\Spati<wbr>alObjects\include\itkMetaScene<wbr>Converter.h 128<u></u><u></u></p>
<p class="MsoNormal">Error 42 error C2065: 'MetaObject' : undeclared identifier C:\ITK2\src\Modules\Core\Spati<wbr>alObjects\include\itkMetaScene<wbr>Converter.h 130<u></u><u></u></p>
<p class="MsoNormal">Error 43 error C2065: 'obj' : undeclared identifier C:\ITK2\src\Modules\Core\Spati<wbr>alObjects\include\itkMetaScene<wbr>Converter.h 130<u></u><u></u></p>
<p class="MsoNormal">Error 44 error C2143: syntax error : missing ',' before ')' C:\ITK2\src\Modules\Core\Spati<wbr>alObjects\include\itkMetaScene<wbr>Converter.h 130<u></u><u></u></p>
<p class="MsoNormal">Error 45 error C2143: syntax error : missing ';' before '}' C:\ITK2\src\Modules\Core\Spati<wbr>alObjects\include\itkMetaScene<wbr>Converter.h 141<u></u><u></u></p>
<p class="MsoNormal">Error 46 fatal error C1004: unexpected end-of-file found C:\ITK2\src\Modules\Core\Spati<wbr>alObjects\include\itkMetaScene<wbr>Converter.h 141<u></u><u></u></p>
<p class="MsoNormal"><u></u> <u></u></p>
<p class="MsoNormal">Additionally, I am using CMake v3.6.1.<u></u><u></u></p>
<p class="MsoNormal"><u></u> <u></u></p>
<p class="MsoNormal">I also tried to build it with VTK v5.10 and ITK v4.2 as suggested by the ITK Bar Camp document provided by this link:<u></u><u></u></p>
<p class="MsoNormal"><a href="http://insightsoftwareconsortium.github.io/ITKBarCamp-doc/ITK/LungNoduleSegmentationWithLSTK.html" target="_blank">http://insightsoftwareconsorti<wbr>um.github.io/ITKBarCamp-doc/<wbr>ITK/LungNoduleSegmentationWith<wbr>LSTK.html</a><u></u><u></u></p>
<p class="MsoNormal"><u></u> <u></u></p>
<p class="MsoNormal">However, cmake showed an error requesting a version of VTK 6.0.0 or newer. I will try this version in the meantime, but was hoping to get some help on building LSTK.<u></u><u></u></p>
<p class="MsoNormal"><u></u> <u></u></p>
<p class="MsoNormal"><u></u> <u></u></p>
<p class="MsoNormal"><span style="color:black">Thanks,<u></u><u></u></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:black">Constance Owens</span><span style="color:black"><u></u><u></u></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:black">Graduate Research Assistant<br>
<br>
</span><b><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#404040">The University of Texas Graduate School of Biomedical Sciences at Houston</span></b><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#404040"><br>
Medical Physics</span><span style="color:black"><u></u><u></u></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#404040"><a href="https://mailbox.mdanderson.org/owa/redir.aspx?REF=1_J6y-0UTLZALKHOYAqJgthiuCumt3SSyTDe5aCeIfM-m0qTq4TTCAFtYWlsdG86Q0FPd2Vuc0BtZGFuZGVyc29uLm9yZw.." target="_blank"><span style="color:#954f72">CAOwens@mdanderson.org</span></a><br>
tel 713-745-3679 | cel 281-770-5210</span><span style="color:black"><u></u><u></u></span></p>
<p class="MsoNormal"><u></u> <u></u></p>
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