[Insight-users] Registration for set of medical images

Luis Ibanez luis.ibanez at kitware.com
Sat Dec 4 19:16:18 EST 2010


Hi H-B,

You will only need to do image registration if you
want to combine more than one input image in
order to compute the segmentation.

In your current case, it seems that you don't
need to register images yet.


    Regards,


           Luis


--------------------------------------------------------
On Thu, Dec 2, 2010 at 12:56 PM, H-B <h4cd at yahoo.com> wrote:

> Hi luis,
>
> ididn't andrestand the your question very well (this is not my first
> language).
>
> i think it is from MRI or CT but it is in png format and i have another
> collection by raw.
>
> there is pure from MRI and Ct but i didn't andrestand the format.
>
> By now i would not register any thing, i will start segmentation using
> VTK_SNAP or 3D Slicer. (i dont know what exactly the type of segmentation
> but i have to convert the data set to .vtk)
>
> Regards
>    H.B
>
> --- On *Thu, 12/2/10, Luis Ibanez <luis.ibanez at kitware.com>* wrote:
>
>
> From: Luis Ibanez <luis.ibanez at kitware.com>
> Subject: Re: [Insight-users] Registration for set of medical images
> To: "H-B" <h4cd at yahoo.com>
> Cc: "itk" <Insight-users at itk.org>
> Date: Thursday, December 2, 2010, 10:52 AM
>
>
> Hi H-B,
>
> This is still quite unclear.
>
> 1) What are the modalities of the two images that you
>     think you should register (MR ? , CT ?...)
>
> 2) What segmentation method are you using ?
>
> It will be helpful is you post a screen shot of your
> current results to a public web site so that we can
> take a look.
>
>
>    Thanks
>
>
>         Luis
>
>
> ------------
> On Thu, Dec 2, 2010 at 9:54 AM, H-B <h4cd at yahoo.com<http://us.mc383.mail.yahoo.com/mc/compose?to=h4cd@yahoo.com>
> > wrote:
>
>   Dear Luis,
>
> i want to segment the organ and i wan the result be good as possible, when
> i try to segment an example (before i reach the visible humen data) it was
> not very good.
> i thenk maybe it is registration problem.
>
> but as i see the registration done for two images (the image and the moving
> image)
>
> so i have to know the moving image and it is deficult
>
> andi send this message to know if i should do registration
>
> or it would be good after remesh using CGALA
>
> Regards
>
>   H.B
>
> --- On *Thu, 12/2/10, Luis Ibanez <luis.ibanez at kitware.com<http://us.mc383.mail.yahoo.com/mc/compose?to=luis.ibanez@kitware.com>
> >* wrote:
>
>
> From: Luis Ibanez <luis.ibanez at kitware.com<http://us.mc383.mail.yahoo.com/mc/compose?to=luis.ibanez@kitware.com>
> >
> Subject: Re: [Insight-users] Registration for set of medical images
> To: "H-B" <h4cd at yahoo.com<http://us.mc383.mail.yahoo.com/mc/compose?to=h4cd@yahoo.com>
> >
> Cc: "itk" <insight-users at itk.org<http://us.mc383.mail.yahoo.com/mc/compose?to=insight-users@itk.org>
> >
> Date: Thursday, December 2, 2010, 9:03 AM
>
>
> Hi H-B,
>
> Thanks for the additional details.
>
> However, you have not explained yet why is that
> you think that you need to do image registration.
>
> Are you anticipating to combine the RGB images
> of the Visible Human dataset with the MR and CT
> ones ?
>
>
>       Luis
>
>
> ---------------------------------------
> On Thu, Dec 2, 2010 at 3:51 AM, H-B <h4cd at yahoo.com<http://us.mc383.mail.yahoo.com/mc/compose?to=h4cd@yahoo.com>
> > wrote:
>
>   Hi Luis,
>
> sory for late. I got the data from visible human project. i want to segment
> liver, kidny, and other organs.
>
> i wont segment it using ITK_SNAP or 3D Slicer. (as i think it is easer than
> programing it with itk)
> in 3D slicer i want to use rubost static segmentation.
>
> Regards,
>   H.B
>
> --- On *Tue, 11/30/10, Luis Ibanez <luis.ibanez at kitware.com<http://us.mc383.mail.yahoo.com/mc/compose?to=luis.ibanez@kitware.com>
> >* wrote:
>
>
> From: Luis Ibanez <luis.ibanez at kitware.com<http://us.mc383.mail.yahoo.com/mc/compose?to=luis.ibanez@kitware.com>
> >
> Subject: Re: [Insight-users] Registration for set of medical images
> To: "H-B" <h4cd at yahoo.com<http://us.mc383.mail.yahoo.com/mc/compose?to=h4cd@yahoo.com>
> >
> Cc: "itk" <insight-users at itk.org<http://us.mc383.mail.yahoo.com/mc/compose?to=insight-users@itk.org>
> >
> Date: Tuesday, November 30, 2010, 10:30 PM
>
>
> H-B,
>
> It depends...
>
> 1) What is the content of your images ?
>
> 2) Do you have multiple modalities ?
>
> 3) What kind of segmentation are you planning to do ?
>
>
>     Luis
>
>
> ------------------------------------------------------------
> On Sun, Nov 28, 2010 at 11:19 AM, H-B <h4cd at yahoo.com<http://us.mc383.mail.yahoo.com/mc/compose?to=h4cd@yahoo.com>
> > wrote:
>
>   Hello,
>
>
> i want to segment objects from set of images (png or dcom).
>
> is the registration important as a preprocees for images? or it wouldn't
> affect?
>
>
> Regards
>
>   H.B
>
>
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