[Insight-developers] Dashboard Cleanup: mini0.nlm MacOSX-cross-rosetta : 50 tests failing

Fri Jan 22 11:04:02 EST 2010

Hi Brad,

I did a make clean.

kitware at dashmacmini3 $ history
...
 3783  cd InsightBuildGcc4.0
 3784  make clean
 3785  make -j5
 3786  ctest -D Experimental -R Nrr
 3787  ../CMake-gcc/bin/ctest -D Experimental -R Nrr

At this point, I've just deleted the build directory and am rebuilding
it. If I get the same result, it will indicate that I cannot duplicate
your result, and we'll have to discuss a way for me to proceed to be
able to do so, to insert NrrdIO files incrementally until I can
ascertain which file is the troublemaker.

Cheers,

Michel

On Fri, Jan 22, 2010 at 10:45 AM, Bradley Lowekamp
<blowekamp at mail.nih.gov> wrote:
> Hello Michel,
>
> I have not done a separate build but, min0 on the nightly board came back clean indicating that the nrrd changes may be the cause of the issue. Did you do a clean build on you system?
>
> Brad
>
> On Jan 22, 2010, at 10:39 AM, Michel Audette wrote:
>
>> Hi Brad,
>>
>> I have reverted to the old NrrdIO files (if you grep Copyright, they
>> are all 2005), committed yesterday, and I'm finding that with
>> CMAKE_OSX_ARCHITECTURES:STRING=ppc that the same tests are failing.
>>
>> I did a ctest -D Experimental -R Nrr
>> http://www.cdash.org/CDash/viewTest.php?onlyfailed&buildid=521044
>>
>> Can you check out ITK, retry it and report back? If that's the case,
>> we should discuss how to proceed, since the recent commits in early
>> January are probably not causing the failing tests that you are
>> seeing.
>>
>> Cheers,
>>
>> Michel
>>
>>
>> On Wed, Jan 20, 2010 at 4:38 PM, Bradley Lowekamp
>> <blowekamp at mail.nih.gov> wrote:
>>> Hello Michel,
>>> The difference is the following CMake variable:
>>> CMAKE_OSX_ARCHITECTURES:STRING=ppc
>>> This makes a build for the PowerPC architecture, but the actual processor is
>>> a x86 intel. The test are run in an emulation mode which apple has for the
>>> transition from ppc to i386 architecture. This is why they are so slow.
>>> Brad
>>> On Jan 20, 2010, at 4:07 PM, Michel Audette wrote:
>>>
>>> Hi Bradley,
>>>
>>> can you indicate to me the difference between your build and the other Mac
>>> builds? I'm doing an experimental now on one of the Macs, and I know that
>>> RogueResearch is all Mac as well, and these machines don't seem to exhibit
>>> the errors.
>>>
>>> Thanks for your kind support.
>>>
>>> Cheers,
>>>
>>> Michel
>>>
>>> On Wed, Jan 20, 2010 at 12:58 PM, Bradley Lowekamp <blowekamp at mail.nih.gov>
>>> wrote:
>>>>
>>>> Hello Gordon,
>>>>
>>>> I have been running that system with the cross compilation for well over a
>>>> year. It has been slow running, and not found may issues before. It has been
>>>> working just fine with NRRD this whole time. This is the day when the errors
>>>> started to occur:
>>>>
>>>> http://www.cdash.org/CDash/index.php?project=Insight&date=2010-01-13
>>>>
>>>> There was not much else updated that day:
>>>>
>>>> http://www.cdash.org/CDash/viewUpdate.php?buildid=513971
>>>>
>>>> Brad
>>>>
>>>>
>>>>
>>>> On Jan 20, 2010, at 12:22 PM, Gordon L. Kindlmann wrote:
>>>>
>>>>> Hi-
>>>>>
>>>>> (Bradley- Hi- I'm not including the whole list but wanted to ask you a
>>>>> question about this)
>>>>>
>>>>> I'm sorry that I haven't been able to keep up with this (the NrrdIO
>>>>> update); lots of other professor responsibilities that I'm behind on
>>>>> as usual.
>>>>>
>>>>> I will review the previous emails (with Luis and Michel) about this
>>>>> now and try to respond.
>>>>>
>>>>> In any case, if things were broken as a results of the updates, those
>>>>> should be backed out.
>>>>>
>>>>> Bradley- have you always been running all the ITK tests under the same
>>>>> cross-endienness cross-compilation?  Had you seen any NRRD-related
>>>>> problems prior to the recent updates?
>>>>>
>>>>> Gordon
>>>>>
>>>>> On Jan 20, 2010, at 10:19 AM, Luis Ibanez wrote:
>>>>>
>>>>>> Brad,
>>>>>>
>>>>>> Thanks a lot for looking into this.
>>>>>>
>>>>>> Is there something that we could do
>>>>>> on our side to track the problem down ?
>>>>>>
>>>>>> Michel:   Could you please follow on this ?
>>>>>>
>>>>>>
>>>>>>    Thanks
>>>>>>
>>>>>>
>>>>>>           Luis
>>>>>>
>>>>>>
>>>>>> -----------------------------------
>>>>>> On Wed, Jan 20, 2010 at 9:43 AM, Bradley Lowekamp
>>>>>> <blowekamp at mail.nih.gov> wrote:
>>>>>>> The occurred with the NRRD upgrade.
>>>>>>>
>>>>>>> Due to the oddness of the cross build,  (Building for ppc, but
>>>>>>> running on an intel) one of the first things I'd check is that the
>>>>>>> endianess is handled correctly. That is is should be a compile time
>>>>>>> check for apple systems. ITK does this correctly, but NRRD may do
>>>>>>> it differently.
>>>>>>>
>>>>>>> Brad
>>>>>>>
>>>>>>> On Jan 20, 2010, at 8:36 AM, Luis Ibanez wrote:
>>>>>>>
>>>>>>>> Hi Brad,
>>>>>>>>
>>>>>>>> There are 50 tests failing in
>>>>>>>>
>>>>>>>>  mini0.nlm
>>>>>>>>  MacOSX-cross-rosetta
>>>>>>>>
>>>>>>>>
>>>>>>>> Most of them seem to be related to IO tests.
>>>>>>>>
>>>>>>>> http://www.cdash.org/CDash/viewTest.php?onlyfailed&buildid=519324
>>>>>>>>
>>>>>>>>
>>>>>>>> Do you have any hint on what may be the source of the problem ?
>>>>>>>>
>>>>>>>>
>>>>>>>>  Thanks
>>>>>>>>
>>>>>>>>
>>>>>>>>     Luis
>>>>>>>
>>>>>>>
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>>>>>
>>>>
>>>
>>>
>>>
>>> --
>>> Michel Audette, Ph.D.
>>> R & D Engineer,
>>> Kitware Inc.,
>>> Chapel Hill, N.C.
>>>
>>>
>>> ========================================================
>>>
>>> Bradley Lowekamp
>>>
>>> Lockheed Martin Contractor for
>>>
>>> Office of High Performance Computing and Communications
>>>
>>> National Library of Medicine
>>>
>>> blowekamp at mail.nih.gov
>>>
>>>
>>
>>
>>
>> --
>> Michel Audette, Ph.D.
>> R & D Engineer,
>> Kitware Inc.,
>> Chapel Hill, N.C.
>
>

-- 
Michel Audette, Ph.D.
R & D Engineer,
Kitware Inc.,
Chapel Hill, N.C.