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Dear IGSTK users:<BR>
<BR>
I have installed and run needlebiopsy.exe, working successfully with Aurora. In the GUI, there is only 3D view of CT sections in the lower right pannel. I would like to build a <FONT style="FONT-SIZE: 12pt" size=3><STRONG>3D model </STRONG><FONT size=2>of the organs in the system. So my question is:</FONT></FONT><BR>
<BR>
Could you tell me the workflow of building 3D models of the organ from CT scan and integrated with NDI tracking system, based needlebiopsy source code?<BR>
<BR>
Thank you and best regards<BR>
<BR>
Kai Yang<BR>
<BR> <BR>> From: igstk-users-request@public.kitware.com<BR>> Subject: IGSTK-Users Digest, Vol 38, Issue 2<BR>> To: igstk-users@public.kitware.com<BR>> Date: Sat, 8 Aug 2009 12:00:05 -0400<BR>> <BR>> Send IGSTK-Users mailing list submissions to<BR>> igstk-users@public.kitware.com<BR>> <BR>> To subscribe or unsubscribe via the World Wide Web, visit<BR>> http://public.kitware.com/cgi-bin/mailman/listinfo/igstk-users<BR>> or, via email, send a message with subject or body 'help' to<BR>> igstk-users-request@public.kitware.com<BR>> <BR>> You can reach the person managing the list at<BR>> igstk-users-owner@public.kitware.com<BR>> <BR>> When replying, please edit your Subject line so it is more specific<BR>> than "Re: Contents of IGSTK-Users digest..."<BR>> <BR>> <BR>> Today's Topics:<BR>> <BR>> 1. IGSTK-4.2 Debug w/ OpenCV (Daly, Mike)<BR>> 2. Re: IGSTK-4.2 Debug w/ OpenCV (Patrick Cheng)<BR>> 3. Re: IGSTK-4.2 Debug w/ OpenCV (Patrick Cheng)<BR>> <BR>> <BR>> ----------------------------------------------------------------------<BR>> <BR>> Message: 1<BR>> Date: Fri, 7 Aug 2009 13:20:03 -0400<BR>> From: "Daly, Mike" <Mike.Daly@rmp.uhn.on.ca><BR>> Subject: [IGSTK-Users] IGSTK-4.2 Debug w/ OpenCV<BR>> To: <igstk-users@public.kitware.com><BR>> Message-ID:<BR>> <EF2641E33162A443B6A43CDBCD160A80037D65@rmpmail01.rmpuhn.ca><BR>> Content-Type: text/plain; charset="iso-8859-1"<BR>> <BR>> IGSTK users,<BR>> <BR>> I'm building IGSTK-4.2 with USE_OpenCV and USE_VideoImager CMake options ON, using the OpenCV May-08-2009 snapshot provided on the Wiki. I can successfully build and run in Release mode, but in Debug mode I encounter the following linker error for many of the example applications (e.g., VideoFrameGrabberAndViewerWebcamWin, NeedleBiopsy):<BR>> <BR>> LINK : fatal error LNK1104: cannot open file 'cxcore110.lib'<BR>> <BR>> Has anyone run IGSTK-4.2 in Debug mode using OpenCV? Note that OpenCV denotes Debug libraries with an extra d (e.g., cxcore110d.lib) under the lib\debug folder, so I'm not sure if it is looking for the wrong file somehow. I have the OpenCV lib\ folders in my path. Any help is appreciated. <BR>> <BR>> Also, does anyone know if you can build OpenCV using static libraries, since requiring .dlls sometimes gets annoying when distributing an .exe?<BR>> <BR>> Thanks,<BR>> Mike Daly<BR>> <BR>> <BR>> <BR>> <BR>> This e-mail may contain confidential and/or privileged information for the sole use of the intended recipient. <BR>> Any review or distribution by anyone other than the person for whom it was originally intended is strictly prohibited. <BR>> If you have received this e-mail in error, please contact the sender and delete all copies. <BR>> Opinions, conclusions or other information contained in this e-mail may not be that of the organization.<BR>> -------------- next part --------------<BR>> An HTML attachment was scrubbed...<BR>> URL: <http://public.kitware.com/pipermail/igstk-users/attachments/20090807/6a218bd5/attachment.html><BR>> <BR>> ------------------------------<BR>> <BR>> Message: 2<BR>> Date: Fri, 07 Aug 2009 14:06:01 -0400<BR>> From: Patrick Cheng <cheng@isis.georgetown.edu><BR>> Subject: Re: [IGSTK-Users] IGSTK-4.2 Debug w/ OpenCV<BR>> To: "Daly, Mike" <Mike.Daly@rmp.uhn.on.ca><BR>> Cc: igstk-users@public.kitware.com<BR>> Message-ID: <4A7C6D09.5040906@isis.georgetown.edu><BR>> Content-Type: text/plain; charset=ISO-8859-1; format=flowed<BR>> <BR>> Hi Mike,<BR>> <BR>> There is some problem with the OpenCV library on the wiki. I haven't got <BR>> time to investigate it.<BR>> <BR>> Supposedly, cmake will handle the linking of library files <BR>> automatically. when you build under debug, it will link to <BR>> "cxcore110d.lib" Somehow, that link is broken here.<BR>> <BR>> As a temporary fix, you can change the line 396 of <BR>> IGSTK\Source\CMakeLists.txt to<BR>> <BR>> SET(EXTRA_LIBS ${EXTRA_LIBS} cxcore110d cv110d highgui110d)<BR>> <BR>> This will work under debug, but not release mode.<BR>> <BR>> I will look into this problem further.<BR>> <BR>> Patrick<BR>> <BR>> Daly, Mike wrote:<BR>> > IGSTK users,<BR>> > <BR>> > I'm building IGSTK-4.2 with USE_OpenCV and USE_VideoImager CMake options <BR>> > ON, using the OpenCV May-08-2009 snapshot provided on the Wiki. I can <BR>> > successfully build and run in Release mode, but in Debug mode I <BR>> > encounter the following linker error for many of the example <BR>> > applications (e.g., VideoFrameGrabberAndViewerWebcamWin, NeedleBiopsy):<BR>> > <BR>> > LINK : fatal error LNK1104: cannot open file 'cxcore110.lib'<BR>> > <BR>> > Has anyone run IGSTK-4.2 in Debug mode using OpenCV? Note that OpenCV <BR>> > denotes Debug libraries with an extra d (e.g., cxcore110d.lib) under the <BR>> > lib\debug folder, so I'm not sure if it is looking for the wrong file <BR>> > somehow. I have the OpenCV lib\ folders in my path. Any help is <BR>> > appreciated.<BR>> > <BR>> > Also, does anyone know if you can build OpenCV using static libraries, <BR>> > since requiring .dlls sometimes gets annoying when distributing an .exe?<BR>> > <BR>> > Thanks,<BR>> > Mike Daly<BR>> > <BR>> > <BR>> > <BR>> > This e-mail may contain confidential and/or privileged information for the sole use of the intended recipient. <BR>> > Any review or distribution by anyone other than the person for whom it was originally intended is strictly prohibited. <BR>> > If you have received this e-mail in error, please contact the sender and delete all copies. <BR>> > Opinions, conclusions or other information contained in this e-mail may not be that of the organization.<BR>> > <BR>> > <BR>> > ------------------------------------------------------------------------<BR>> > <BR>> > _______________________________________________<BR>> > Powered by www.kitware.com<BR>> > <BR>> > Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html<BR>> > <BR>> > Follow this link to subscribe/unsubscribe:<BR>> > http://public.kitware.com/cgi-bin/mailman/listinfo/igstk-users<BR>> <BR>> <BR>> ------------------------------<BR>> <BR>> Message: 3<BR>> Date: Fri, 07 Aug 2009 15:20:36 -0400<BR>> From: Patrick Cheng <cheng@isis.georgetown.edu><BR>> Subject: Re: [IGSTK-Users] IGSTK-4.2 Debug w/ OpenCV<BR>> To: "Daly, Mike" <Mike.Daly@rmp.uhn.on.ca><BR>> Cc: igstk-users@public.kitware.com<BR>> Message-ID: <4A7C7E84.3050500@isis.georgetown.edu><BR>> Content-Type: text/plain; charset=ISO-8859-1; format=flowed<BR>> <BR>> Hi Mike,<BR>> <BR>> It has been fixed now.<BR>> <BR>> The correct solution should be:<BR>> http://public.kitware.com/cgi-bin/viewcvs.cgi/Source/CMakeLists.txt?root=IGSTK&r1=1.49&r2=1.50&sortby=date<BR>> <BR>> Please check out the latest cvs version of IGSTK to get this fix.<BR>> <BR>> Thank you for reporting the bug.<BR>> <BR>> Patrick<BR>> <BR>> Patrick Cheng wrote:<BR>> > Hi Mike,<BR>> > <BR>> > There is some problem with the OpenCV library on the wiki. I haven't got <BR>> > time to investigate it.<BR>> > <BR>> > Supposedly, cmake will handle the linking of library files <BR>> > automatically. when you build under debug, it will link to <BR>> > "cxcore110d.lib" Somehow, that link is broken here.<BR>> > <BR>> > As a temporary fix, you can change the line 396 of <BR>> > IGSTK\Source\CMakeLists.txt to<BR>> > <BR>> > SET(EXTRA_LIBS ${EXTRA_LIBS} cxcore110d cv110d highgui110d)<BR>> > <BR>> > This will work under debug, but not release mode.<BR>> > <BR>> > I will look into this problem further.<BR>> > <BR>> > Patrick<BR>> > <BR>> > Daly, Mike wrote:<BR>> >> IGSTK users,<BR>> >><BR>> >> I'm building IGSTK-4.2 with USE_OpenCV and USE_VideoImager CMake <BR>> >> options ON, using the OpenCV May-08-2009 snapshot provided on the <BR>> >> Wiki. I can successfully build and run in Release mode, but in Debug <BR>> >> mode I encounter the following linker error for many of the example <BR>> >> applications (e.g., VideoFrameGrabberAndViewerWebcamWin, NeedleBiopsy):<BR>> >><BR>> >> LINK : fatal error LNK1104: cannot open file 'cxcore110.lib'<BR>> >><BR>> >> Has anyone run IGSTK-4.2 in Debug mode using OpenCV? Note that OpenCV <BR>> >> denotes Debug libraries with an extra d (e.g., cxcore110d.lib) under <BR>> >> the lib\debug folder, so I'm not sure if it is looking for the wrong <BR>> >> file somehow. I have the OpenCV lib\ folders in my path. Any help is <BR>> >> appreciated.<BR>> >><BR>> >> Also, does anyone know if you can build OpenCV using static libraries, <BR>> >> since requiring .dlls sometimes gets annoying when distributing an .exe?<BR>> >><BR>> >> Thanks,<BR>> >> Mike Daly<BR>> >><BR>> >><BR>> >><BR>> >> This e-mail may contain confidential and/or privileged information for <BR>> >> the sole use of the intended recipient. Any review or distribution by <BR>> >> anyone other than the person for whom it was originally intended is <BR>> >> strictly prohibited. If you have received this e-mail in error, please <BR>> >> contact the sender and delete all copies. Opinions, conclusions or <BR>> >> other information contained in this e-mail may not be that of the <BR>> >> organization.<BR>> >><BR>> >><BR>> >> ------------------------------------------------------------------------<BR>> >><BR>> >> _______________________________________________<BR>> >> Powered by www.kitware.com<BR>> >><BR>> >> Visit other Kitware open-source projects at <BR>> >> http://www.kitware.com/opensource/opensource.html<BR>> >><BR>> >> Follow this link to subscribe/unsubscribe:<BR>> >> http://public.kitware.com/cgi-bin/mailman/listinfo/igstk-users<BR>> > _______________________________________________<BR>> > Powered by www.kitware.com<BR>> > <BR>> > Visit other Kitware open-source projects at <BR>> > http://www.kitware.com/opensource/opensource.html<BR>> > <BR>> > Follow this link to subscribe/unsubscribe:<BR>> > http://public.kitware.com/cgi-bin/mailman/listinfo/igstk-users<BR>> > <BR>> > <BR>> <BR>> <BR>> ------------------------------<BR>> <BR>> _______________________________________________<BR>> IGSTK-Users mailing list<BR>> IGSTK-Users@public.kitware.com<BR>> http://public.kitware.com/cgi-bin/mailman/listinfo/igstk-users<BR>> <BR>> End of IGSTK-Users Digest, Vol 38, Issue 2<BR>> ******************************************<BR><br /><hr />Buddy is 10! 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