From bastil2001 at yahoo.de  Sun Nov 15 06:01:36 2015
From: bastil2001 at yahoo.de (bastil2001)
Date: Sun, 15 Nov 2015 12:01:36 +0100
Subject: [Girder-users] Installation in virtualbox
In-Reply-To: <56486487.60008@yahoo.de>
References: <56486487.60008@yahoo.de>
Message-ID: <56486610.7050909@yahoo.de>

Hello all,

I am currently tring girder. I installed it on avirtualbox. Host system
is a Gentoo Linux, Guest is CentOS 7. I followed the documentation to
get it running and it went fine. I Know the server is up, I can see the
start page using the "lynx" command-based browser in the guest.

However, I am struggling to access the server from my host.

1. Do I have to install the girder web client part on the host?
2. What network settings do I need to route a default girder to the
host? I tried bridged network and NAT with port forwarding of port 8080
without success.


Thanks Bastian



From bastil2001 at yahoo.de  Sun Nov 15 05:55:03 2015
From: bastil2001 at yahoo.de (bastil2001)
Date: Sun, 15 Nov 2015 11:55:03 +0100
Subject: [Girder-users] Installation in virtualbox
Message-ID: <56486487.60008@yahoo.de>

Hello all,

I am currently tring girder. I installed it on avirtualbox. Host system
is a Gentoo Linux, Guest is CentOS 7. I followed the documentation to
get it running and it went fine.

I Know the server is up, I can see the start page using the "lynx"
command-based browser in the guest. However, I am struggling to access
the server from my host.

1. Do I have to install the girder web client part on the host?
2. What network settings do I need to route a default girder to the
host? I tried bridged network and NAT with port forwarding of port 8080
without success.

Thanks Bastian

From zach.mullen at kitware.com  Sun Nov 15 13:39:05 2015
From: zach.mullen at kitware.com (Zach Mullen)
Date: Sun, 15 Nov 2015 13:39:05 -0500
Subject: [Girder-users] Installation in virtualbox
In-Reply-To: <56486487.60008@yahoo.de>
References: <56486487.60008@yahoo.de>
Message-ID: <CAPzddEHvUhXLPK0_k7QxJFAaQGc1uN_PDAv-3zpaQAMtPc_=PA@mail.gmail.com>

Hi Bastian,

You won't need to install anything on the host, if you can access the start
page from within the guest that means it's running, so it seems to be a
simple issue of port forwarding from guest to host. In virtualbox, go to
Settings -> Network -> Advanced -> Port Forwarding. You should make sure
that whatever port you were able to access via lynx in the guest is listed
as the guest port, and that it is mapped to a port number in the host that
you have permission to bind to. You'll probably need to restart the VM
before it will take effect.

Thanks,


Zach Mullen
Kitware, Inc.
919-869-8858

On Sun, Nov 15, 2015 at 5:55 AM, bastil2001 <bastil2001 at yahoo.de> wrote:

> Hello all,
>
> I am currently tring girder. I installed it on avirtualbox. Host system
> is a Gentoo Linux, Guest is CentOS 7. I followed the documentation to
> get it running and it went fine.
>
> I Know the server is up, I can see the start page using the "lynx"
> command-based browser in the guest. However, I am struggling to access
> the server from my host.
>
> 1. Do I have to install the girder web client part on the host?
> 2. What network settings do I need to route a default girder to the
> host? I tried bridged network and NAT with port forwarding of port 8080
> without success.
>
> Thanks Bastian
> _______________________________________________
> Girder-users mailing list
> Girder-users at public.kitware.com
> http://public.kitware.com/mailman/listinfo/girder-users
>
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From zach.mullen at kitware.com  Sun Nov 15 17:50:09 2015
From: zach.mullen at kitware.com (Zach Mullen)
Date: Sun, 15 Nov 2015 17:50:09 -0500
Subject: [Girder-users] Installation in virtualbox
In-Reply-To: <56490B16.5070508@yahoo.de>
References: <56486487.60008@yahoo.de>
 <CAPzddEHvUhXLPK0_k7QxJFAaQGc1uN_PDAv-3zpaQAMtPc_=PA@mail.gmail.com>
 <5648F209.5070701@yahoo.de>
 <CAPzddEFF=u3V5t39bNmOtaEi-sjySjUT52YUH3T6C=SBSu7SnA@mail.gmail.com>
 <56490B16.5070508@yahoo.de>
Message-ID: <CAPzddEEpL_8GL0cNUgkdeVpncATA2N0y8oS+pWs_cQzrKD3a2A@mail.gmail.com>

Modifying of both the front-end and back-end is best achieved using
Girder's plugin system. Development of plugins is documented here:

http://girder.readthedocs.org/en/latest/plugin-development.html

If it's still unclear how to achieve what you want, please ping this list
so that we can provide help and improve the documentation in the future.

Thanks,


Zach Mullen
Kitware, Inc.
919-869-8858

On Sun, Nov 15, 2015 at 5:45 PM, bastil2001 <bastil2001 at yahoo.de> wrote:

> Hello Zach,
>
> it is working now. The problem was an active firewall "firewalld" on the
> CentOS 7 guest system. I will go on with the system configuration now.
> Is there some documentation about how to modify the way the start page
> looks like (logos, ...?).
>
> Regards Bastian
>
>
> Am 15.11.2015 um 22:16 schrieb Zach Mullen:
>
> It should be reachable at 8080 on the host... I typically use virtualbox
> in the context of Vagrant, and in that case when I forward a port out of
> the guest I am able to reach it at http://0.0.0.0:9080 in the host. Sorry
> I can't be of more help, but without having access to the VM in question
> it's difficult for me to figure out exactly what might be going wrong.
>
> Zach Mullen
> Kitware, Inc.
> 919-869-8858
>
> On Sun, Nov 15, 2015 at 3:58 PM, bastil2001 <bastil2001 at yahoo.de> wrote:
>
>> Hello Zach,
>>
>> I agree with your conclusion. However I am struggeling with port
>> forwarding and don't know how to resolve this. Sorry this is a virtualbox
>> issue but I hope you can help me either. Girder runs in the guest on
>> <http://0.0.0.0:8080>http://0.0.0.0:8080. I defined a port forwarding
>> from Guest 8080 to Host 8080. So Girder should be reachable under
>> http://0.0.0.0:8080 on the host, right? However, this gives me nothing
>> than an endlessly loading webbrowser and a "page is not reachable" at the
>> end. I don't know how to debug this.
>>
>> Bastian
>>
>>
>> Am 15.11.2015 um 19:39 schrieb Zach Mullen:
>>
>> Hi Bastian,
>>
>> You won't need to install anything on the host, if you can access the
>> start page from within the guest that means it's running, so it seems to be
>> a simple issue of port forwarding from guest to host. In virtualbox, go to
>> Settings -> Network -> Advanced -> Port Forwarding. You should make sure
>> that whatever port you were able to access via lynx in the guest is listed
>> as the guest port, and that it is mapped to a port number in the host that
>> you have permission to bind to. You'll probably need to restart the VM
>> before it will take effect.
>>
>> Thanks,
>>
>>
>> Zach Mullen
>> Kitware, Inc.
>> 919-869-8858
>>
>> On Sun, Nov 15, 2015 at 5:55 AM, bastil2001 < <bastil2001 at yahoo.de>
>> bastil2001 at yahoo.de> wrote:
>>
>>> Hello all,
>>>
>>> I am currently tring girder. I installed it on avirtualbox. Host system
>>> is a Gentoo Linux, Guest is CentOS 7. I followed the documentation to
>>> get it running and it went fine.
>>>
>>> I Know the server is up, I can see the start page using the "lynx"
>>> command-based browser in the guest. However, I am struggling to access
>>> the server from my host.
>>>
>>> 1. Do I have to install the girder web client part on the host?
>>> 2. What network settings do I need to route a default girder to the
>>> host? I tried bridged network and NAT with port forwarding of port 8080
>>> without success.
>>>
>>> Thanks Bastian
>>> _______________________________________________
>>> Girder-users mailing list
>>> Girder-users at public.kitware.com
>>> http://public.kitware.com/mailman/listinfo/girder-users
>>>
>>
>>
>>
>
>
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From zach.mullen at kitware.com  Tue Nov 17 07:36:45 2015
From: zach.mullen at kitware.com (Zach Mullen)
Date: Tue, 17 Nov 2015 07:36:45 -0500
Subject: [Girder-users] Installation in virtualbox
In-Reply-To: <564ADCA8.2020106@yahoo.de>
References: <56486487.60008@yahoo.de>
 <CAPzddEHvUhXLPK0_k7QxJFAaQGc1uN_PDAv-3zpaQAMtPc_=PA@mail.gmail.com>
 <5648F209.5070701@yahoo.de>
 <CAPzddEFF=u3V5t39bNmOtaEi-sjySjUT52YUH3T6C=SBSu7SnA@mail.gmail.com>
 <56490B16.5070508@yahoo.de>
 <CAPzddEEpL_8GL0cNUgkdeVpncATA2N0y8oS+pWs_cQzrKD3a2A@mail.gmail.com>
 <564ADCA8.2020106@yahoo.de>
Message-ID: <CAPzddEF0WUEPouxOU0JjgUR5S48RVDSxo09-8HUfNpgQ6BAZKw@mail.gmail.com>

Hi Bastian,

The following section of the docs describes how to extend the web client
application:
file:///Users/zach/dev/girder/docs/_build/html/plugin-development.html#extending-the-client-side-application

To modify the title bar to make it say something other than "Girder", you'd
add the following in your plugin's javascript:


girder.wrap(girder.views.LayoutHeaderView, 'render', function (render) {
    render.call(this);
    this.$('.g-app-title').text('Foo');
});

To modify the front page logo, it's pretty similar:

girder.wrap(girder.views.FrontPageView, 'render', function (render) {
    render.call(this);
    this.$('img.g-frontpage-logo').attr('src', 'http://path/to/image/url');
});


HTH,


Zach Mullen
Kitware, Inc.
919-869-8858

On Tue, Nov 17, 2015 at 2:52 AM, bastil2001 <bastil2001 at yahoo.de> wrote:

> Hello Zach,
>
> I have the basic system running now. Regarding modifications it is unclear
> to me how to modify start page and title bar (logo, ...). Maybe you can
> provide some help with this. Thanks.
>
> Kind regards
>
> Bastian
>
>
> Am 15.11.2015 um 23:50 schrieb Zach Mullen:
>
> Modifying of both the front-end and back-end is best achieved using
> Girder's plugin system. Development of plugins is documented here:
>
> http://girder.readthedocs.org/en/latest/plugin-development.html
>
> If it's still unclear how to achieve what you want, please ping this list
> so that we can provide help and improve the documentation in the future.
>
> Thanks,
>
>
> Zach Mullen
> Kitware, Inc.
> 919-869-8858
>
> On Sun, Nov 15, 2015 at 5:45 PM, bastil2001 <bastil2001 at yahoo.de> wrote:
>
>> Hello Zach,
>>
>> it is working now. The problem was an active firewall "firewalld" on the
>> CentOS 7 guest system. I will go on with the system configuration now.
>> Is there some documentation about how to modify the way the start page
>> looks like (logos, ...?).
>>
>> Regards Bastian
>>
>>
>> Am 15.11.2015 um 22:16 schrieb Zach Mullen:
>>
>> It should be reachable at 8080 on the host... I typically use virtualbox
>> in the context of Vagrant, and in that case when I forward a port out of
>> the guest I am able to reach it at <http://0.0.0.0:9080>
>> http://0.0.0.0:9080 in the host. Sorry I can't be of more help, but
>> without having access to the VM in question it's difficult for me to figure
>> out exactly what might be going wrong.
>>
>> Zach Mullen
>> Kitware, Inc.
>> 919-869-8858
>>
>> On Sun, Nov 15, 2015 at 3:58 PM, bastil2001 < <bastil2001 at yahoo.de>
>> bastil2001 at yahoo.de> wrote:
>>
>>> Hello Zach,
>>>
>>> I agree with your conclusion. However I am struggeling with port
>>> forwarding and don't know how to resolve this. Sorry this is a virtualbox
>>> issue but I hope you can help me either. Girder runs in the guest on
>>> <http://0.0.0.0:8080>http://0.0.0.0:8080. I defined a port forwarding
>>> from Guest 8080 to Host 8080. So Girder should be reachable under
>>> http://0.0.0.0:8080 on the host, right? However, this gives me nothing
>>> than an endlessly loading webbrowser and a "page is not reachable" at the
>>> end. I don't know how to debug this.
>>>
>>> Bastian
>>>
>>>
>>> Am 15.11.2015 um 19:39 schrieb Zach Mullen:
>>>
>>> Hi Bastian,
>>>
>>> You won't need to install anything on the host, if you can access the
>>> start page from within the guest that means it's running, so it seems to be
>>> a simple issue of port forwarding from guest to host. In virtualbox, go to
>>> Settings -> Network -> Advanced -> Port Forwarding. You should make sure
>>> that whatever port you were able to access via lynx in the guest is listed
>>> as the guest port, and that it is mapped to a port number in the host that
>>> you have permission to bind to. You'll probably need to restart the VM
>>> before it will take effect.
>>>
>>> Thanks,
>>>
>>>
>>> Zach Mullen
>>> Kitware, Inc.
>>> 919-869-8858
>>>
>>> On Sun, Nov 15, 2015 at 5:55 AM, bastil2001 < <bastil2001 at yahoo.de>
>>> bastil2001 at yahoo.de> wrote:
>>>
>>>> Hello all,
>>>>
>>>> I am currently tring girder. I installed it on avirtualbox. Host system
>>>> is a Gentoo Linux, Guest is CentOS 7. I followed the documentation to
>>>> get it running and it went fine.
>>>>
>>>> I Know the server is up, I can see the start page using the "lynx"
>>>> command-based browser in the guest. However, I am struggling to access
>>>> the server from my host.
>>>>
>>>> 1. Do I have to install the girder web client part on the host?
>>>> 2. What network settings do I need to route a default girder to the
>>>> host? I tried bridged network and NAT with port forwarding of port 8080
>>>> without success.
>>>>
>>>> Thanks Bastian
>>>> _______________________________________________
>>>> Girder-users mailing list
>>>> Girder-users at public.kitware.com
>>>> http://public.kitware.com/mailman/listinfo/girder-users
>>>>
>>>
>>>
>>>
>>
>>
>
>
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From zach.mullen at kitware.com  Tue Nov 17 07:37:44 2015
From: zach.mullen at kitware.com (Zach Mullen)
Date: Tue, 17 Nov 2015 07:37:44 -0500
Subject: [Girder-users] Installation in virtualbox
In-Reply-To: <CAPzddEF0WUEPouxOU0JjgUR5S48RVDSxo09-8HUfNpgQ6BAZKw@mail.gmail.com>
References: <56486487.60008@yahoo.de>
 <CAPzddEHvUhXLPK0_k7QxJFAaQGc1uN_PDAv-3zpaQAMtPc_=PA@mail.gmail.com>
 <5648F209.5070701@yahoo.de>
 <CAPzddEFF=u3V5t39bNmOtaEi-sjySjUT52YUH3T6C=SBSu7SnA@mail.gmail.com>
 <56490B16.5070508@yahoo.de>
 <CAPzddEEpL_8GL0cNUgkdeVpncATA2N0y8oS+pWs_cQzrKD3a2A@mail.gmail.com>
 <564ADCA8.2020106@yahoo.de>
 <CAPzddEF0WUEPouxOU0JjgUR5S48RVDSxo09-8HUfNpgQ6BAZKw@mail.gmail.com>
Message-ID: <CAPzddEHGWSJzQE9w0kAzY20P26uKpd1Ro_+bAgjAyfr_X7vWOQ@mail.gmail.com>

Whoops, accidentally linked to my locally built docs. Here is the real
link:
http://girder.readthedocs.org/en/latest/plugin-development.html#extending-the-client-side-application

Zach Mullen
Kitware, Inc.
919-869-8858

On Tue, Nov 17, 2015 at 7:36 AM, Zach Mullen <zach.mullen at kitware.com>
wrote:

> Hi Bastian,
>
> The following section of the docs describes how to extend the web client
> application:
> file:///Users/zach/dev/girder/docs/_build/html/plugin-development.html#extending-the-client-side-application
>
> To modify the title bar to make it say something other than "Girder",
> you'd add the following in your plugin's javascript:
>
>
> girder.wrap(girder.views.LayoutHeaderView, 'render', function (render) {
>     render.call(this);
>     this.$('.g-app-title').text('Foo');
> });
>
> To modify the front page logo, it's pretty similar:
>
> girder.wrap(girder.views.FrontPageView, 'render', function (render) {
>     render.call(this);
>     this.$('img.g-frontpage-logo').attr('src', 'http://path/to/image/url'
> );
> });
>
>
> HTH,
>
>
> Zach Mullen
> Kitware, Inc.
> 919-869-8858
>
> On Tue, Nov 17, 2015 at 2:52 AM, bastil2001 <bastil2001 at yahoo.de> wrote:
>
>> Hello Zach,
>>
>> I have the basic system running now. Regarding modifications it is
>> unclear to me how to modify start page and title bar (logo, ...). Maybe you
>> can provide some help with this. Thanks.
>>
>> Kind regards
>>
>> Bastian
>>
>>
>> Am 15.11.2015 um 23:50 schrieb Zach Mullen:
>>
>> Modifying of both the front-end and back-end is best achieved using
>> Girder's plugin system. Development of plugins is documented here:
>>
>> http://girder.readthedocs.org/en/latest/plugin-development.html
>>
>> If it's still unclear how to achieve what you want, please ping this list
>> so that we can provide help and improve the documentation in the future.
>>
>> Thanks,
>>
>>
>> Zach Mullen
>> Kitware, Inc.
>> 919-869-8858
>>
>> On Sun, Nov 15, 2015 at 5:45 PM, bastil2001 <bastil2001 at yahoo.de> wrote:
>>
>>> Hello Zach,
>>>
>>> it is working now. The problem was an active firewall "firewalld" on the
>>> CentOS 7 guest system. I will go on with the system configuration now.
>>> Is there some documentation about how to modify the way the start page
>>> looks like (logos, ...?).
>>>
>>> Regards Bastian
>>>
>>>
>>> Am 15.11.2015 um 22:16 schrieb Zach Mullen:
>>>
>>> It should be reachable at 8080 on the host... I typically use virtualbox
>>> in the context of Vagrant, and in that case when I forward a port out of
>>> the guest I am able to reach it at <http://0.0.0.0:9080>
>>> http://0.0.0.0:9080 in the host. Sorry I can't be of more help, but
>>> without having access to the VM in question it's difficult for me to figure
>>> out exactly what might be going wrong.
>>>
>>> Zach Mullen
>>> Kitware, Inc.
>>> 919-869-8858
>>>
>>> On Sun, Nov 15, 2015 at 3:58 PM, bastil2001 < <bastil2001 at yahoo.de>
>>> bastil2001 at yahoo.de> wrote:
>>>
>>>> Hello Zach,
>>>>
>>>> I agree with your conclusion. However I am struggeling with port
>>>> forwarding and don't know how to resolve this. Sorry this is a virtualbox
>>>> issue but I hope you can help me either. Girder runs in the guest on
>>>> <http://0.0.0.0:8080>http://0.0.0.0:8080. I defined a port forwarding
>>>> from Guest 8080 to Host 8080. So Girder should be reachable under
>>>> http://0.0.0.0:8080 on the host, right? However, this gives me nothing
>>>> than an endlessly loading webbrowser and a "page is not reachable" at the
>>>> end. I don't know how to debug this.
>>>>
>>>> Bastian
>>>>
>>>>
>>>> Am 15.11.2015 um 19:39 schrieb Zach Mullen:
>>>>
>>>> Hi Bastian,
>>>>
>>>> You won't need to install anything on the host, if you can access the
>>>> start page from within the guest that means it's running, so it seems to be
>>>> a simple issue of port forwarding from guest to host. In virtualbox, go to
>>>> Settings -> Network -> Advanced -> Port Forwarding. You should make sure
>>>> that whatever port you were able to access via lynx in the guest is listed
>>>> as the guest port, and that it is mapped to a port number in the host that
>>>> you have permission to bind to. You'll probably need to restart the VM
>>>> before it will take effect.
>>>>
>>>> Thanks,
>>>>
>>>>
>>>> Zach Mullen
>>>> Kitware, Inc.
>>>> 919-869-8858
>>>>
>>>> On Sun, Nov 15, 2015 at 5:55 AM, bastil2001 < <bastil2001 at yahoo.de>
>>>> bastil2001 at yahoo.de> wrote:
>>>>
>>>>> Hello all,
>>>>>
>>>>> I am currently tring girder. I installed it on avirtualbox. Host system
>>>>> is a Gentoo Linux, Guest is CentOS 7. I followed the documentation to
>>>>> get it running and it went fine.
>>>>>
>>>>> I Know the server is up, I can see the start page using the "lynx"
>>>>> command-based browser in the guest. However, I am struggling to access
>>>>> the server from my host.
>>>>>
>>>>> 1. Do I have to install the girder web client part on the host?
>>>>> 2. What network settings do I need to route a default girder to the
>>>>> host? I tried bridged network and NAT with port forwarding of port 8080
>>>>> without success.
>>>>>
>>>>> Thanks Bastian
>>>>> _______________________________________________
>>>>> Girder-users mailing list
>>>>> Girder-users at public.kitware.com
>>>>> http://public.kitware.com/mailman/listinfo/girder-users
>>>>>
>>>>
>>>>
>>>>
>>>
>>>
>>
>>
>
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From zach.mullen at kitware.com  Thu Nov 19 16:00:49 2015
From: zach.mullen at kitware.com (Zach Mullen)
Date: Thu, 19 Nov 2015 16:00:49 -0500
Subject: [Girder-users] Girder v1.4.0 released
Message-ID: <CAPzddEExCmXdRcBjRoT-L4UnAsUeMetVn3ZkW7pEQ4WRQLVbyA@mail.gmail.com>

The Girder dev team is proud to announce the release of a new minor version
of Girder. The release notes for version 1.4.0 can be found here:
https://github.com/girder/girder/releases/tag/v1.4.0

Please let us know if you experience any problems installing or upgrading
to the new version.

Thanks,

Zach Mullen
Kitware, Inc.
919-869-8858
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From Brian.Chapman at utah.edu  Tue Nov 24 13:26:58 2015
From: Brian.Chapman at utah.edu (Brian E Chapman)
Date: Tue, 24 Nov 2015 18:26:58 +0000
Subject: [Girder-users] Girder People @ RSNA
Message-ID: <D279F9FE.191C8%brian.chapman@utah.edu>

Anyone on the Girder team going to be at RSNA sometime between Monday and Wednesday? If so, I?d be interested in getting together to pick brains a bit.

Brian

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From patrick.reynolds at kitware.com  Wed Nov 25 09:00:30 2015
From: patrick.reynolds at kitware.com (Patrick Reynolds)
Date: Wed, 25 Nov 2015 09:00:30 -0500
Subject: [Girder-users] Girder People @ RSNA
In-Reply-To: <D279F9FE.191C8%brian.chapman@utah.edu>
References: <D279F9FE.191C8%brian.chapman@utah.edu>
Message-ID: <CACKEKOARxqxcQdPcfrrw_U1UOK5OFigdjp1bVu73ECLdX25bEw@mail.gmail.com>

Hi Brian,

I asked around in our Medical group at Kitware and among other Girder
developers, and it doesn't sound like anyone will be at RSNA this year. Let
us know if we can help you get going with Girder (especially if you find
the documentation lacking).

Thanks,
Patrick Reynolds
Technical Leader
Kitware, Inc.
919 869 8848

On Tue, Nov 24, 2015 at 1:26 PM, Brian E Chapman <Brian.Chapman at utah.edu>
wrote:

> Anyone on the Girder team going to be at RSNA sometime between Monday and
> Wednesday? If so, I?d be interested in getting together to pick brains a
> bit.
>
> Brian
>
>
> _______________________________________________
> Girder-users mailing list
> Girder-users at public.kitware.com
> http://public.kitware.com/mailman/listinfo/girder-users
>
>
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