<div dir="ltr"><div><div><div><div>Hello Abdelkhalek,<br><br></div>Could you be more specific by what you mean by "creating a manual segmentation using ITK"?<br>Typically, when creating a manual segmentation, you want to interact or draw over an image. There are plenty of software that already offer you that option such as Slicer3D [1].<br></div>If you want to manually create a manual segmentation by explicitly setting pixel values, you can look at the examples here on how to read and write images [2] and this example [3] on how to set values at a certain location in the image.<br><br></div>Hope that helps,<br><br></div>Francois<br><div><div><br>[1] <a href="https://www.slicer.org/">https://www.slicer.org/</a><br>[2] <a href="https://itk.org/ITKExamples/src/IO/ImageBase/index.html">https://itk.org/ITKExamples/src/IO/ImageBase/index.html</a><br>[3] <a href="https://itk.org/ITKExamples/src/Core/Common/SetPixelValueInOneImage/Documentation.html">https://itk.org/ITKExamples/src/Core/Common/SetPixelValueInOneImage/Documentation.html</a><br><div class="gmail_extra"><br><div class="gmail_quote">On Tue, Sep 27, 2016 at 12:35 AM, Abdelkhalek Bakkari <span dir="ltr"><<a href="mailto:bakkari.abdelkhalek@hotmail.fr" target="_blank">bakkari.abdelkhalek@hotmail.fr</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex">




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<p>Dear itk users,</p>
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<p>I would like to ask about the steps of creating a manual segmentation using ITK.<br>
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Thank you in advance.</p>
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<p>Best regards,</p>
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</p>
<div><font face="Garamond" size="3">Abdelkhalek Bakkari</font>
<div><span style="line-height:14px"><font face="Garamond" size="3">Ph.D candidate in Computer Science</font></span></div>
<div><span style="line-height:20.8267px;background-color:rgb(255,255,255)"><font face="Garamond" size="3">Institute of Applied Computer Science</font></span></div>
<div><span style="line-height:18.4px"><font face="Garamond" size="3">Lodz University of Technology, Poland</font></span></div>
<div><span style="line-height:18.4px"><font face="Garamond" size="3"><br>
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