<div dir="ltr">Thanks!<div><br></div><div>Clean build and test on my machine this time, show's green on the dash for 4th.<br><br><div class="gmail_quote"><div dir="ltr">On Tue, 22 Dec 2015 at 15:57 Matt McCormick <<a href="mailto:matt.mccormick@kitware.com">matt.mccormick@kitware.com</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">On behalf of the Insight Toolkit community, we are proud to announce<br>
that ITK 4.9 release candidate 3 has been tagged and is available for<br>
testing! Please take this opportunity to test the new features in the<br>
release candidate.<br>
<br>
<br>
To obtain the source code,<br>
<br>
git clone <a href="http://itk.org/ITK.git" rel="noreferrer" target="_blank">http://itk.org/ITK.git</a><br>
cd ITK<br>
git checkout -q --detach v4.9rc03<br>
<br>
For more details, please see the Git documentation [1].<br>
<br>
<br>
A few selected highlights for this release:<br>
<br>
* New Remote modules: the Cuberille module for smooth generation of<br>
meshes from binary segmentation images, and the<br>
AnisotropicDiffusionLBR module improved edge-preserving smoothing.<br>
* Build your own ITK module outside the source tree, add continuous<br>
integration testing on GitHub, and easily add Python wrapping for your<br>
C++ algorithms.<br>
* Python wrapping, including Python 3, builds faster with a more<br>
standard installation<br>
* Improved performance of itk::Image::GetPixel and operations on<br>
itk::VariableLengthVector’s<br>
* Generate a FlatStructuringElement from an image<br>
* Point-set registration with time-varying B-splines<br>
* Module dependencies can now be specified as public / private / compile / test<br>
<br>
<br>
Please test the release candidate and share your experiences on the<br>
mailing list, issue tracker, and Gerrit Code Review. The new module<br>
dependency specification mechanism may unearth missing dependencies<br>
for projects that use ITK COMPONENTS with the CMake find_package<br>
command.<br>
<br>
<br>
An Experimental build, which demonstrates how the test suite performs<br>
on your local build system, can be submitted to the dashboard [2]<br>
with:<br>
<br>
mkdir ../ITK-build<br>
cd ../ITK-build<br>
cmake ../ITK<br>
ctest -j 4 -M Experimental -T Configure -T Build -T Test -T Submit<br>
<br>
Visual Studio builds must also add “-C Release” to the ctest command.<br>
<br>
Notify the mailing list if there are any unexpected failures. Testing<br>
your own applications against the RC is also appreciated.<br>
<br>
<br>
Congratulations and well done to the 43 contributors to this release.<br>
We would especially like to recognize the new contributors: Mikhail<br>
Isakov, Betsy McPhail, Luc Hermitte, Shawn Waldon, Tobias Wood,<br>
Ricardo Ortiz, Sreekanth Arikatla, Hyun Jae Kang, Lucas Gandel, Adam<br>
Snyder, Junjie Bai, Seun Odutola, Abhishek Tiwari, Eugene Prilepin,<br>
Zach Williamson, Alexander Leinoff, Alexis Girault, Laurentiu Nicola,<br>
Floris Berendsen, Max Smolens, and Pablo Hernandez-Cerdan.<br>
<br>
Many community members stepped up to contribute fixes for this release<br>
candidate. To allow testing and accommodate the upcoming holiday, the<br>
final release is re-scheduled for mid-January.<br>
<br>
<br>
Known issues in this release candidate, to be fixed before the final release:<br>
* TransformReadWriteTest fails on Mac OSX with shared libraries.<br>
* Mac OSX 10.6 has build errors.<br>
<br>
<br>
[1] <a href="http://www.itk.org/Wiki/ITK/Git" rel="noreferrer" target="_blank">http://www.itk.org/Wiki/ITK/Git</a><br>
<br>
[2] <a href="http://open.cdash.org/index.php?project=Insight" rel="noreferrer" target="_blank">http://open.cdash.org/index.php?project=Insight</a><br>
<br>
<br>
<br>
New Features<br>
---------------------<br>
<br>
* Wrapping improvements<br>
* Python 3 supported<br>
* Wrapping builds much faster due to CastXML binaries<br>
* LandmarkBasedTransformInitializer now wrapped<br>
* NumPy bridge with VisualStudio<br>
* Wrapping for the MinimalPathExtraction module<br>
* Wrapping is now installed into Python’s site-packages directory<br>
in the “itk” package<br>
* Wrapping package size is decreased<br>
* Better package portability on Mac OSX<br>
<br>
* New Remote Modules<br>
* Cuberille<br>
* Insight Journal Article: <a href="http://hdl.handle.net/10380/3186" rel="noreferrer" target="_blank">http://hdl.handle.net/10380/3186</a><br>
* AnisotropicDiffusionLBR<br>
* Insight Journal Article: <a href="http://hdl.handle.net/10380/3505" rel="noreferrer" target="_blank">http://hdl.handle.net/10380/3505</a><br>
* Web browser reproducibility: <a href="http://www.kitware.com/blog/home/post/942" rel="noreferrer" target="_blank">http://www.kitware.com/blog/home/post/942</a><br>
<br>
* Core Improvements<br>
* External Modules can now be developed outside of the ITK source<br>
tree and on GitHub<br>
* Details: <a href="http://www.kitware.com/blog/home/post/997" rel="noreferrer" target="_blank">http://www.kitware.com/blog/home/post/997</a><br>
* New utilities in itk::Math:<br>
* AlmostEquals<br>
* NotAlmostEquals<br>
* ExactlyEquals<br>
* NotExactlyEquals<br>
* New itk::NumericTraits<br>
* IsInteger<br>
* IsSigned<br>
* Improved C++11 support<br>
* New ITK_DELETE_FUNCTION macro for “=delete”<br>
* New ITK_NOEXCEPT macro for the “noexcept” keyword<br>
* Improved capabilities of itk::ResourceProbe and<br>
itk::ResourceProbesCollectorBase<br>
* Improve numerical stability in VNL eigen system estimation<br>
* itksys_ios:: and itksys_stl:: have been remove (use std::)<br>
<br>
* Filtering Improvements<br>
* Generate a FlatStructuringElement from an image<br>
* WarpImageFilter support VectorImage’s<br>
* ConvertLabelMap supports different LabelMap types<br>
* ImageToPathFilter moved from the ITKReview to the ITKPath module<br>
* itk::MovingHistogramImageFilter moved to the ITKImageFilterBase module<br>
<br>
* Registration Improvements<br>
* Point-set registration with time-varying B-splines<br>
<br>
* Build Improvements<br>
* Module dependencies can now be specified as public / private /<br>
compile / test<br>
* BUILD_EXAMPLES CMake option is now OFF by default<br>
* Option to export all library symbols on Windows:<br>
* Details: <a href="http://www.kitware.com/blog/home/post/939" rel="noreferrer" target="_blank">http://www.kitware.com/blog/home/post/939</a><br>
* Expat third party library is now name mangled<br>
* Many more modules can be built as shared libraries<br>
* KWStyle is automatically built and configured when tests are built<br>
<br>
* Performance Improvements<br>
* New MetaProgrammingLibrary namespace (itk::mpl) holds members for<br>
metaprogramming<br>
* itk::mpl::{TrueType,FalseType}<br>
* itk::mpl::{If,Not,And,Or,Xor}<br>
* itk::mpl::EnableIf<br>
* itk::mpl::IsBaseOf<br>
* itk::mpl::IsConvertible<br>
* itk::mpl::IsNumber<br>
* itk::mpl::IsSame<br>
* itk::mpl::PromoteType<br>
* Image::GetPixel performance improvements<br>
* Many itk::VariableLengthVector performance improvements<br>
* AdaptiveHistogramEqualization uses a moving histogram<br>
* WarpImageFilter performance improvements<br>
<br>
* Documentation Improvements<br>
* Updates to the Software Guide, Doxygen, Wiki and Sphinx Examples<br>
* ITK Software Guide improvements<br>
* How to use Python wrapping<br>
* How to create an ITK module<br>
* Improvements to segmentation examples<br>
* Expanded Canny edge detection example<br>
* Expanded tree container example<br>
<br>
* Third Party Library Updates<br>
* FFTW updated to latest upstream<br>
* Build with recent OpenCV 2 and 3<br>
* Build with the latest VTK<br>
* PNG update to the latest upstream<br>
* GDCM updated to the latest upstream<br>
* KWSys updated to the latest upstream<br>
* MINC updated to the latest upstream<br>
* SWIG updated to the latest upstream<br>
* Third party PNG and MINC are now Git subtrees<br>
<br>
* Style improvements -- ITK gets more stylish with every release!<br>
* Private copy constructors and operator= use ITK_DELETE_FUNCTION<br>
<br>
* Improved code coverage -- we are at 84.9%!<br>
<br>
* *Lots* of important bug fixes<br>
<br>
* And much more! See details in the log below.<br>
<br>
<br>
Changes from v4.9rc02..v4.9rc03<br>
------------------------------------------------<br>
<br>
Alexis Girault (1):<br>
BUG: Implement SetAutoMinimumMaximum in itkScalarImageToHistogramGenerator<br>
<br>
Bill Lorensen (1):<br>
BUG: nifti_read_subregion_image was leaking file pointers<br>
<br>
Brad King (7):<br>
ENH: Teach ITK module macros to support independent header-only modules<br>
ENH: Add script to import KWIML library source code<br>
ENH: Add `ITKKWIML` module to provide external KWIML library<br>
ENH: Port TIFF integer types from KWSys to KWIML<br>
ENH: Port LSM integer types from KWSys to KWIML<br>
ENH: Port itkIntTypes.h from KWSys to KWIML<br>
ENH: Drop KWSys FundamentalType component<br>
<br>
Bradley Lowekamp (1):<br>
ENH: Add option to choose scheme for git download<br>
<br>
Davis Vigneault (1):<br>
STYLE: Use cstdlib return macros in ITK examples<br>
<br>
Dženan Zukić (3):<br>
BUG: do not pass 0,0,0 to Versor.Set()<br>
STYLE: Removing the unused NeighborhoodRadius property<br>
ENH: Write out transform in DeformableRegistration15<br>
<br>
Gert Wollny (1):<br>
BUG: Remove double-conversion from public interface, use system.<br>
<br>
Hyun Jae Kang (8):<br>
ENH: Use a data struct to export the system information of a probe.<br>
ENH: Create a test for the SpawnThread function ( ITK-3317)<br>
STYLE: Remove an unnecessary file (-w) from source code<br>
BUG: Fixed the failed case of itkStdStreamStateSaveTest on OS X 10.8<br>
BUG: Fixed the failed test case of itkThreadPoolTest on OS X 10.8<br>
BUG: Fixed a failed test of ITKDistanceMapTestDriver<br>
BUG: Fixed the failed test VideoSourceTest<br>
PERF: Improve the performance of a test of<br>
ITKRegistrationMethodsv4TestDriver<br>
COMP: Fixed the compiler error of<br>
itkDisplacementFieldToBSplineImageFilterTest<br>
<br>
Jean-Christophe Fillion-Robin (25):<br>
BUG: Build ITKIOTransformHDF5 as shared library. See #3393<br>
BUG: Build ITKIOTransformMINC as shared library. See #3393<br>
BUG: Build ITKIOTransformMatlab as shared library. See #3393<br>
BUG: Build ITKIOTransformInsightLegacy as shared library. See #3393<br>
STYLE: TransformIOFactory: Remove obsolete declaration. See #3393<br>
COMP: TransformIOFactory: Add missing ctor/dtor from hxx file. See #3393<br>
COMP: TransformFileWriter: Remove method "OpenStream()" without definition<br>
COMP: TransformFileReaderTemplate: Remove undefined method<br>
"CreateTransform()"<br>
ENH: Update ITKIOPhilipsREC to allow static initialization. See #3393<br>
ENH: Update ITKIOTransformMINC to allow static initialization. See #3393<br>
COMP: MINC: Fix VS2008 "unknown round" build error. See #3393<br>
COMP: MINC: Fix VS2008 "unknown arpa/inet.h" build error. See #3393<br>
COMP: Configure ENABLE_SHARED into <ModuleName>.cmake file. See #3393<br>
COMP: Fix configuration of IOFactory header. See #3393<br>
STYLE: UseITK: Removed redundant code setting ImageIO factory<br>
name. See #3393<br>
STYLE: UseITK: Re-factor introducing _configure_IOFactoryRegisterManager<br>
STYLE: UseITK: Set TransformIO factory and module name using convention.<br>
BUG: Ensure Image IO factories are registered once. See #3393<br>
BUG: Ensure Transform IO factories are registered once.<br>
COMP: ITKIOXML: Fix VS11 "already defined std::string" link<br>
error. See #3393<br>
BUG: TransformIO: Implement explicit template instantiation<br>
using "extern".<br>
COMP: TransformIO: Fix VS build errors removing extra EXPORT<br>
COMP: TransformIO: Handle compiler not supporting "pragma diagnostic".<br>
COMP: TransformIO: TransformFile(Reader|Writer) still need to be exported.<br>
COMP: TransformIO: Fix explicit instantiation approach<br>
<br>
Johan Andruejol (1):<br>
ENH: Add ITK_RUNTIME_LIBRARY_DIRS for external projects<br>
<br>
KWIML Upstream (1):<br>
KWIML 2015-12-09 (43f9f8d0)<br>
<br>
Lucas Gandel (1):<br>
BUG: PhysicsBasedNonRigidRegistrationMethod test failure on Debian 32bit<br>
<br>
Matthew McCormick (16):<br>
COMP: Fix PointDimension reference in AzimuthElevationToCartesian test.<br>
STYLE: Improve scoping in AzimuthElevationToCartesian test.<br>
STYLE: Explicitly mark the ProcessObject methods virtual in SignedMaurer.<br>
BUG: Do not try to install targets that do not exist when<br>
building externally.<br>
BUG: ITKIOMeta needs a public dependency on ITKMetaIO.<br>
COMP: Update LesionSizingToolkit for external build and style<br>
test failures.<br>
BUG: Add CMake OpenCV export code to ITKVideoBridgeOpenCV.<br>
COMP: Improve compatibility with OpenCV 3.<br>
DOC: Fix class references in StatisticsLabelMapFilter.<br>
STYLE: Improved readability of itkStatisticsUniqueLabelMapFilterTest1.<br>
DOC: Correct ReverseOrdering description in ShapeUniqueLabelMapFilter.<br>
STYLE: Add own copy of GenerateExportHeader<br>
COMP: Create _TEMPLATE_EXPORT macros.<br>
COMP: TransformIOBaseTemplate must be explicitly instantiated.<br>
BUG: Do not use dynamic_cast for DisplacementFieldType in HDF5 test.<br>
COMP: Do not use string(MAKE_C_IDENTIFIER with CMake < 2.8.12<br>
<br>
Max Smolens (1):<br>
BUG: VoronoiSegmentationRGBImageFilter: add pixel dimension check<br>
<br>
Mikhail Isakov (1):<br>
DOC: correction in DiffusionTensor3D Reconstruction<br>
<br>
Ricardo Ortiz (1):<br>
BUG: Set itkBinaryImageTo*LabelMapFilter foreground/background values<br>
<br>
Seun Odutola (1):<br>
BUG: absolute value of tolerance taken to cater for negative spacing<br>
<br>
Shawn Waldon (1):<br>
COMP: OSX set deployment target when building fftw<br>
<br>
Simon Alexander (4):<br>
STYLE: Change to make git bash on windows happy with the function name<br>
COMP: fixes for visual studio 2015update1 x86 in release mode<br>
COMP: fixes for visual studio 2015update1 x86 in release mode<br>
COMP: fixes for visual studio 2015update1 x86 in release mode<br>
<br>
Sreekanth Arikatla (2):<br>
BUG: Resolved const correctness in itkMatrix.h<br>
ENH: Fixes the symmetry of AzimuthElevationToCartesianTransform<br>
and adds tests<br>
<br>
<br>
Changes from v4.9rc01..v4.9rc02<br>
------------------------------------------------<br>
<br>
Bill Lorensen (1):<br>
BUG: Valgrind detected an invalid read<br>
<br>
Davis Vigneault (1):<br>
STYLE: Address some warnings when running cppcheck<br>
<br>
Hyun Jae Kang (2):<br>
COMP: Fixed a warning message of data-conversion on VS14<br>
COMP: Update KWStyle to remove format-string warning message<br>
<br>
Matthew McCormick (3):<br>
DOC: Remove invalid wrapping example.<br>
BUG: Wrap AdaptiveEqualizationHistogram.<br>
COMP: Ignore Doxygen endcond warning in itkIsConvertible.h.<br>
<br>
Seun Odutola (1):<br>
COMP: Corrected minc2.h path installation from libsrc2/minc2.h to minc2.h<br>
<br>
Ziv Yaniv (2):<br>
BUG: Affine transformation was estimated without sufficient<br>
number of points.<br>
BUG: fixed BSpline initializer crash when reference image not set.<br>
<br>
<br>
Changes from v4.8.0..v4.9rc01<br>
--------------------------------------------<br>
<br>
Abhishek Tiwari (1):<br>
BUG: "tmpImageIndex" not initialized to 0.<br>
<br>
Adam Snyder (1):<br>
PERF: Reworked MMI Threading using a per-thread buffer<br>
<br>
Alexander Leinoff (6):<br>
ENH: Adds IsInteger and IsSigned to NumericTraits.<br>
COMP: Doxygen itkMath.h 'OneValue()' could not be resolved.<br>
ENH: Adds ExactlyEquals and NotExactlyEquals functions to itkMath.h<br>
COMP: Removes floating-point equality checks<br>
ENH: COMP: Adds support for complex values to Math::AlmostEquals<br>
ENH: Updates fftw dependency<br>
<br>
Arnaud Gelas (5):<br>
COMP: fix warning (unused local typedef)<br>
COMP: simplify ITKVideoBridgeOpenCV dependency<br>
DOC: add doxgen documentation for BinaryImageToLevelSetImageAdaptor<br>
ENH: add tests to exercise itk::ThreadedIteratorRangePartitioner<br>
COMP: fix compilation error with OpenCV2 and OpenCV3<br>
<br>
Betsy McPhail (1):<br>
BUG: Improve buffer alignment in OctreeNode .<br>
<br>
Bill Hoffman (2):<br>
ENH: Use new CMake Windows export symbol dll feature.<br>
COMP: Put vnl_export.h in the list of sources so it gets installed.<br>
<br>
Bill Lorensen (4):<br>
COMP: VTkGlue linker errors<br>
BUG: Inappropriate use of AlmostEquals<br>
ENH: Bump tag for wiki examples<br>
ENH: Better layout strategy<br>
<br>
Brad King (3):<br>
ENH: Remove use of include <itksys/ios/*> and itksys_ios::*<br>
ENH: Remove use of include <itksys/stl/*> and itksys_stl::*<br>
ENH: Update CMake Policy settings in Testing/TestExternal project<br>
<br>
Bradley Lowekamp (31):<br>
BUG: Avoid null deference in PrintSelf with default construction<br>
ENH: Enable base classes for templates of landmark initializer<br>
STYLE: Use "Swap" for ITK member name<br>
BUG: Demonstrate Eigen analysis failure<br>
BUG: Fix computation of Eigen analysis<br>
ENH: Update DiscreteHessianGaussian Test baseline<br>
ENH: Correctly demonstrate float point Eigen failure<br>
ENH: compile vnl_math_hypot, and use at least double<br>
ENH: Adding initial update script from used libpng version.<br>
ENH: removing non-subtree files for itkpng<br>
ENH: Ported ITK changes for building to subtree merged code<br>
ENH: Update libpng update script for v1.6.9<br>
BUG: Use ParameterValueType for computation of landmark affine<br>
ENH: Wrap LandmarkBasedTransformInitializer<br>
BUG: Avoid potential exception in itk::Object::UnRegister<br>
ENH: Update itkpng zlib, configuration, and rename<br>
ENH: Update itkpng name mangling<br>
BUG: Use const pointer in Set method for constant ReferenceImage ivar<br>
BUG: Increase tolerance for PhysicsBasedNonRigidRegistrationMethod<br>
BUG: Demonstrate side effect on registration due to BSplineScatter change<br>
ENH: Move MovingHistogramImageFilter base classes to ImageFilterBase<br>
BUG: Avoid potential exception in itk::Object::UnRegister<br>
BUG: Avoid null deference in PrintSelf with default construction<br>
BUG: Use const pointer in Set method for constant ReferenceImage ivar<br>
ENH: Optimize AdaptiveHistogramEqualization with MovingHistogram base<br>
COMP: address sign unsigned comparison warning<br>
COMP: Address signed unsigned comparison warning<br>
COMP: Address unused member variable and methods in anonymous ns<br>
BUG: Fix segfault when with empty IsolatedWatershed Threshold range<br>
BUG: Adjust intensity tolerance for PhysicsBasedNonRigid test<br>
BUG: Reduce number of targets with MSVC<br>
<br>
Davis Vigneault (7):<br>
DOC: Minor improvements to segmentation examples.<br>
DOC: Expanded Canny Edge Detection Example<br>
DOC: Expanded TreeContainer Example<br>
COMP: Warnings in itkVTKImageExport when compiling with c++11<br>
COMP: Warnings in FFTW Classes when compiling with c++11<br>
COMP: Update Git Tag for Subdivision Module<br>
COMP: Warnings in FFTW Classes when compiling with c++11<br>
<br>
Dženan Zukić (1):<br>
STYLE: better formatting of the "usage" message<br>
<br>
Eugene Prilepin (1):<br>
BUG: Fix a template name formation in python wrappings<br>
<br>
Floris Berendsen (1):<br>
STYLE: Improve naming conventions in comments.<br>
<br>
Hans Johnson (29):<br>
STYLE: Instrument for FixedParameters typedef<br>
BUG: Demonstrate DisplacementTransformFailure<br>
BUG: FixedParameters should be double precision<br>
STYLE: Minor code style issues for MGHIO<br>
COMP: Update to version for WikiExamples<br>
ENH: Update Sphinx for ITK 4.8.0<br>
ENH: Update MGHIO to be shared lib<br>
ENH: Provide consistent floating point comparisons<br>
BUG: Fix MGHIO to fix write failures<br>
PERF: Remove floating point as sentinal value<br>
COMP: Const correctness needs to be maintained<br>
BUG: Preserve backwards compatibility<br>
DOC: Provide consistent naming in comments<br>
ENH: Conversion between transform type tolerance<br>
STYLE: Prefer initialization to assignment<br>
ENH: Missing ITK_OVERRIDE<br>
COMP: Need to propagate ITKGDCM<br>
COMP: Need to propagate ITKGDCM<br>
COMP: Add missing ITK_OVERRIDE<br>
STYLE: Minor code style issues for MGHIO<br>
COMP: Update to version for WikiExamples<br>
ENH: Update Sphinx for ITK 4.8.0<br>
ENH: Update MGHIO to be shared lib<br>
BUG: Fix MGHIO to fix write failures<br>
ENH: C++11 allows for rigorous =delete<br>
COMP: Remove unnecessary failing assert test<br>
ENH: Ignore internal files for the Clion editor<br>
COMP: Fix VNL compilation for wider C++11 support<br>
BUG: In configuration test need to mirror code<br>
<br>
Hyun Jae Kang (27):<br>
BUG: Remove std::cout calls from class<br>
BUG: Avoid an unexpected output of static_cast<br>
BUG: Update python example codes for ImageRegistration<br>
BUG: Retrieve the missed wrap file<br>
BUG: itkVTKImageIO class does not handle blank lines in VTK file header.<br>
BUG: Fix HDF5 CMake configuration with VS2015<br>
BUG: Fix a compilation issue on ITK4 with FFTW and shared libraries<br>
BUG: Fixed older XCode linking error<br>
ENH: Use CastXML binaries when building with x86_64 Mac OS X<br>
BUG: Remove std::cout calls from class<br>
BUG: itkVTKImageIO class does not handle blank lines in VTK file header.<br>
BUG: Fixed older XCode linking error<br>
ENH: Add automatic KWStyle build and configuration setup<br>
COMP: KWStyle shadow, format-nonliteral and autological-compare warning.<br>
COMP: Fixed the warning messages from itkGPU Module<br>
COMP: Fixed a warning message of unused-private-field<br>
COMP: Apply latest version of KWStyle<br>
COMP: Update KWStyle to fix its additional warning messages<br>
COMP: Update KWStyle to fix its additional warning messages<br>
COMP: Fix data-conversion warning messages on Windows<br>
ENH: Update itkResourceProbe to calculate statistical data<br>
COMP: Fix data-conversion warning messages on VS14<br>
COMP: Fixed 'std::sqrt' : ambiguous call to overloaded function<br>
ENH: Update the Report() function of itkResourceProbesCollectorBase<br>
COMP: Fix data-conversion warning message on itkResourceProbe<br>
COMP: Fix additional warning messages of KWStyle<br>
COMP: Fix data-conversion warning messages<br>
<br>
Jon Haitz Legarreta (6):<br>
ENH: Add test for itkStatisticsUniqueLabelMapFilter<br>
BUG: Fix compilation issues for StatisticsUniqueLabelMapFilterTest<br>
BUG: Fix comparison issues for itkStatisticsUniqueLabelMapFilter<br>
BUG: Test for StatisticsUniqueLabelMapFilter stability<br>
ENH: Add test for itkParametricStpaceToImageSpaceFilter<br>
ENH: Improve code coverage for itkParametricSpaceToImageSpaceMeshFilter<br>
<br>
Julien Michel (1):<br>
ENH: Support of VectorImage as template parameters for WarpImageFilter<br>
<br>
Junjie Bai (2):<br>
BUG: ConvertLabelMap with different LabelMapTypes<br>
BUG: LabelObject CopyAttribute support different LabelObject type<br>
<br>
KWSys Robot (4):<br>
KWSys 2015-07-10 (c9336bcf)<br>
KWSys 2015-07-30 (f63febb7)<br>
KWSys 2015-08-24 (cdaf522c)<br>
KWSys 2015-08-28 (dc3fdd7f)<br>
<br>
LIBPNG Upstream (2):<br>
PNG 2009-04-06 (e68f5a36)<br>
PNG 2014-02-05 (3e753eb8)<br>
<br>
Laurentiu Nicola (2):<br>
PERF: Avoid temporary smartptr in ProcessObject::GetInput<br>
PERF: Optimize WarpImageFilter by avoiding refcount bouncing<br>
<br>
Luc Hermitte (8):<br>
PERF: itk::Image::GetPixel() performance improvment.<br>
PERF: Performance enhancements on VariableLengthVectors 1/...<br>
ENH: Dependencies on itkVariableLengthVector.h reduced<br>
BUG: Error in VariableLengthVector Unit Tests<br>
PERF: Performance enhancements on VLV 2/...<br>
PERF: Performances enhancements on VLV 3/...<br>
COMP: Fix signed/unsigned warnings<br>
BUG: std::copy/fill on empty VLV<br>
<br>
Lucas Gandel (4):<br>
ENH: Move ImageToPathFilter from ITKReview to ITKPath module.<br>
BUG: Fixing ImageToPathFilter wrapping call from Review Module<br>
STYLE: Fix KWStyle dashboard errors<br>
BUG: Fix external module BUILD_SHARED_LIBS status<br>
<br>
Mathieu Malaterre (1):<br>
BUG: Name mangle the included expat third party library.<br>
<br>
Matthew McCormick (94):<br>
ENH: Change itkSystemInformationTest to itkCMakeConfigurationTest.<br>
ENH: Add AnisotropicDiffusionLBR Remote Module.<br>
ENH: Bump ITK version to 4.9.0.<br>
BUG: Remove std::cout calls from classes.<br>
COMP: Remove unused argument in ConditionVariableNoThreads.<br>
BUG: Implement UpdateLargestPossibleRegion for ImageToVTKImageFilter.<br>
COMP: Add link interface specification for wrapping target_link_libraries.<br>
STYLE: Fix indentation in itkMINCTransformIOFactory.cxx.<br>
COMP: Fix MINCTransformIO factory registration.<br>
COMP: Add -D_LARGEFILE64_SOURCE for HDF5 with Emscripten-1.<br>
COMP: Remove unknown doxygen command in AnisotropicDiffusionLBR.<br>
BUG: Initialize mutex for 32 bit AtomicInt.<br>
ENH: Use CastXML binaries when building with x86_64 Linux.<br>
STYLE: Rename gccxml -> castxml in {idx,igenerator}.py.<br>
COMP: Disable the gold linker for static builds on Ubuntu 14.04.<br>
ENH: Use Windows binaries for CastXML.<br>
ENH: Add better scoping in igenerator.py.<br>
BUG: Fix CMAKE_BUILD_TYPE initialization with Ninja + MSVC.<br>
BUG: LevelSetsv4 used signed char instead of char.<br>
ENH: Add better scoping to idx.py.<br>
COMP: Define newSize and oldSize in VariableLengthVector.<br>
STYLE: Use prefix increment operator in ImageBase.<br>
DOC: Correct spelling of Continuous.<br>
ENH: Add more progress information to IterativeClosestPoint2.<br>
BUG: Build BridgeNumPy with Visual Studio.<br>
ENH: Add ITKModuleExternal.cmake<br>
COMP: Wrap Image< bool, D > for FlatStructuringElement.<br>
BUG: Use CastXML binary built in Release.<br>
BUG: ContinuousIndex should not be templated over TCoordRep.<br>
COMP: Set CMP0054 to new.<br>
COMP: Address line length too long for Software Guide.<br>
COMP: Fix CannyEdgeDetectionImageFilter.cxx types.<br>
BUG: Support Python 3 wrapping module initialization.<br>
BUG: Update itkTemplate.py for Python 3.<br>
BUG: Update itkExtras.py for Python 3.<br>
BUG: Prevent Python callback addition recursion.<br>
BUG: Fix test scripts for Python 3.<br>
BUG: Replace __GCCXML__ with CABLE_CONFIGURATION.<br>
ENH: Allow projects to build against an external module.<br>
ENH: Replace CABLE_CONFIGURATION with ITK_WRAPPING_PARSER.<br>
ENH: Rename _cable_ to _wrappers_.<br>
BUG: Replace __GCCXML__ with CABLE_CONFIGURATION.<br>
BUG: Define ITK_WRAPPING_PARSER when wrapping.<br>
COMP: Do not use C++11 alignas in itkAlignedTypedef.<br>
ENH: Bump CMakeLists.txt version to 4.8.1.<br>
BUG: Pass the CMAKE_CXX_FLAGS to castxml.<br>
ENH: Bump CastXML version to 2015-30-29.<br>
ENH: Bump LLVM / Clang to 3.7.0.<br>
COMP: Avoid itklibminc linking with ITK_USE_SYSTEM_HDF5.<br>
COMP: Add missing ITKIOImageBase dependency for ITKTransformMINC.<br>
COMP: Use itkSimpleNewMacro in ThreadedIteratorRangePartitionerTest.<br>
ENH: Add wrapping support for building modules externally.<br>
BUG: Fix KWStyle test paths when building a module externally.<br>
ENH: Add Cuberille Remote module.<br>
COMP: Remove carriage returns from Cuberille remote.<br>
COMP: Remove unused argument in ConditionVariableNoThreads.<br>
DOC: Correct spelling of Continuous.<br>
ENH: Bump the MinimalPathExtraction Remote to 2015-10-20.<br>
COMP: Fix KernelTransform SetFixedParameters argument type.<br>
STYLE: Use prefix increment operator in ImageBase.<br>
COMP: Use ITK's pygccxml by correctly setting up the sys.path<br>
Revert "COMP: Put vnl_export.h in the list of sources so it gets<br>
installed."<br>
BUG: Revert "BUG: ConvertLabelMap with different LabelMapTypes"<br>
ENH: Marking wrapping CMake configuration variables as advanced.<br>
STYLE: Rename CASTXML to CASTXML_EXECUTABLE.<br>
COMP: Non-virtual copy attribute members in LabelMap cannot have override.<br>
COMP: Add wrapping for AdaptiveHistogramEqualizationImageFilter.<br>
COMP: Add itkMacro.h to itkPromoteType.h for ITK_EXCEPT.<br>
ENH: Remove CMake version check in ITKModuleHeaderTest.cmake<br>
BUG: Improve KWStyle ExternalProject utilization.<br>
ENH: Remove old KWStyle build script.<br>
COMP: Address VariableLengthVector Doxygen rhs @param not found.<br>
ENH: Rename WRAPPING_LIBRARY_GROUPS to WRAPPING_SUBMODULE_ORDER.<br>
ENH: Install Python bindings into site-packages.<br>
ENH: Improve readability of Python site-packages path detection.<br>
COMP: DiscreteGaussianDerivativeImageFilter unsigned expression warning.<br>
BUG: ITKCommon publically depends on ITKDoubleConversion.<br>
COMP: Improve scoping in CovariantVectorGeometryTest.<br>
ENH: Improves names and export of module dependencies.<br>
STYLE: Improve namespace bracket style in itkIsConvertible.<br>
COMP: Set CMP0054 to new.<br>
BUG: Remove unused wrapping files.<br>
BUG: Do install install wrapping development files.<br>
ENH: Add WRAP_ITK_INSTALL_COMPONENT_IDENTIFIER.<br>
BUG: Remove duplicate inclusion of wrapping submodules.<br>
COMP: Do not use C++ style comments for Doxygen cond.<br>
BUG: Fix detection of the gold linker.<br>
BUG: Update Python package installation locations.<br>
ENH: Bump CMakeLists.txt version to 4.8.2.<br>
ENH: Change BUILD_EXAMPLES default to OFF.<br>
BUG: Use 'from itk import ITKCommon' in module2module test.<br>
COMP: Link to VTK Python when built with Kits support.<br>
BUG: Install itk_minc2.h header.<br>
COMP: ITKIOMINC has a public dependency on ITKIOImageBase.<br>
<br>
Michka Popoff (9):<br>
ENH: Update to swig 3.0.7<br>
ENH: Do not link against specific Python library on OS X<br>
COMP: Fix wrapping warnings when building with ITK_WRAP_IMAGE_DIMS=2<br>
COMP: Add missing wrapping for TransformBase<br>
COMP: Use ITK's pygccxml by correctly setting up the sys.path<br>
COMP: Disable incompatible modules when using Python 3 wrapping<br>
COMP: Move MovingHistogramImageFilterBase wrapping to<br>
ImageFilterBase module<br>
COMP: Disable incompatible modules when using Python 3 wrapping<br>
ENH: Allow operations on Indexes and Offsets in Python<br>
<br>
Mikhail Isakov (1):<br>
BUG: DiffusionTensor3DReconstruction segfault if no baseline image<br>
<br>
Nick Tustison (5):<br>
BUG: Set a default b-spline epsilon.<br>
ENH: Adding testing for closed loop.<br>
BUG: Updating B-spline classes with the same epsilon strategy.<br>
PERF: Switch vnl_vectors for fixed arrays.<br>
ENH: Point-set registration with time-varying B-spline.<br>
<br>
Olivier Commowick (3):<br>
BUG: Correct discrepancy in tridiagonal reduction wrt VNL eigen system<br>
BUG: Correct under/overflows in vnl_math_hypot (taken from pythag from V3P)<br>
BUG: Switch eigenvalues computation to double<br>
<br>
Pablo Hernandez-Cerdan (2):<br>
ENH: Help class for itkFlatStructuringElement with constructor from images.<br>
COMP: Fix test errors and warnings in FlatStructuringElement.<br>
<br>
Seun Odutola (1):<br>
COMP: Fixed name clash with Apple header (check Macro), renamed<br>
check to Check<br>
<br>
Shawn Waldon (1):<br>
COMP: Set target OS X version in environment for tools using compiler<br>
<br>
Simon Alexander (1):<br>
BUG: incorrect closest point computation<br>
<br>
Tobias Wood (2):<br>
BUG: LBFGSB was printing messages even with debug switched off.<br>
BUG: Removed an unguarded print statement.<br>
<br>
Vladimir S. FONOV (9):<br>
BUG: Missing ITKIOMINC_EXPORT on __Private()<br>
COMP: Changing the order of HDF5 library components<br>
COMP: Splitting up IOMINC module into two parts: MINC and Transform<br>
STYLE: updated comments to properly reference LIBMINC<br>
ENH: Add script to merge upstream MINC as a subtree<br>
MINC 2015-07-23 (c033d431)<br>
COMP: Update MINC CMake code<br>
MINC 2015-08-18 (6d7e3ba8)<br>
MINC 2015-09-13 (95cd5374)<br>
<br>
Xiaoxiao Liu (1):<br>
DOC: update email address for xiaoxiao.<br>
<br>
Zach Williamson (10):<br>
BUG: Use correct libraries for ImageFusion tests<br>
ENH: Consolidate Library Dependencies<br>
COMP: Add a missing link to Review module<br>
COMP: Use correct linking macro in DCMTK<br>
BUG: Use correct libraries for TestKernel tests<br>
COMP: Fix inconsistant naming of GPUPDEDeformableRegistration<br>
ENH: Use new linking system macros<br>
PERF: Avoid searching private dependencies for include directories<br>
COMP: Recover missing dependencies<br>
ENH: use new linking macros in Filtering module<br>
<br>
<br>
<br>
-----------------------------------------------------<br>
Errors or omissions? Please fix them here:<br>
<br>
<a href="https://docs.google.com/document/d/1j3IAZFfi0ToO8N6hTr0fVTTMmHIMkXAxx0AsAajsYuM/edit" rel="noreferrer" target="_blank">https://docs.google.com/document/d/1j3IAZFfi0ToO8N6hTr0fVTTMmHIMkXAxx0AsAajsYuM/edit</a><br>
_____________________________________<br>
Powered by <a href="http://www.kitware.com" rel="noreferrer" target="_blank">www.kitware.com</a><br>
<br>
Visit other Kitware open-source projects at<br>
<a href="http://www.kitware.com/opensource/opensource.html" rel="noreferrer" target="_blank">http://www.kitware.com/opensource/opensource.html</a><br>
<br>
Kitware offers ITK Training Courses, for more information visit:<br>
<a href="http://www.kitware.com/products/protraining.php" rel="noreferrer" target="_blank">http://www.kitware.com/products/protraining.php</a><br>
<br>
Please keep messages on-topic and check the ITK FAQ at:<br>
<a href="http://www.itk.org/Wiki/ITK_FAQ" rel="noreferrer" target="_blank">http://www.itk.org/Wiki/ITK_FAQ</a><br>
<br>
Follow this link to subscribe/unsubscribe:<br>
<a href="http://public.kitware.com/mailman/listinfo/insight-users" rel="noreferrer" target="_blank">http://public.kitware.com/mailman/listinfo/insight-users</a><br>
</blockquote></div></div></div>