<html><head><meta http-equiv="Content-Type" content="text/html charset=us-ascii"></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space;">David,<div><br></div><div>The new hotness is the 0.9 beta 1 release :)</div><div><br><div><div>On Feb 23, 2015, at 12:27 PM, David Welch <<a href="mailto:david.m.welch@gmail.com">david.m.welch@gmail.com</a>> wrote:</div><br class="Apple-interchange-newline"><blockquote type="cite"><meta http-equiv="Content-Type" content="text/html; charset=utf-8"><div dir="ltr">Hi Brad and all, <div><br></div><div>I'm trying to upgrade a virtualenv to 0.8.1 and I'm getting this error when I try to read an image:</div><div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left-width:1px;border-left-color:rgb(204,204,204);border-left-style:solid;padding-left:1ex"><p class=""><span class="">RuntimeError</span><span class="">: Exception thrown in SimpleITK ReadImage: /scratch/dashboards/SimpleITK-OSX10.6-intel-pkg/SimpleITK/Code/IO/src/sitkImageReaderBase.cxx:50:</span></p><p class=""><span class="">sitk::ERROR: Unable to determine ImageIO reader for "/Shared/sinapse/CACHE/20141124_TrackOn_long_Results/HDNI_004/048157730/048157730_20140908_30/TissueClassify/fixed_brainlabels_seg.nii.gz"</span></p></blockquote><div>The '/scratch/dashboards/...' path is not local - I think this is an error in the wheel file? </div><div><br></div></div></div></blockquote><div><br></div><div>The "/scratch/dashboards/" is the path to CXX source when it was build on the build server.</div><br><blockquote type="cite"><div dir="ltr"><div><div>I removed and reinstalled SimpleITK:</div><div><br></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left-width:1px;border-left-color:rgb(204,204,204);border-left-style:solid;padding-left:1ex">pip uninstall SimpleITK </blockquote><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left-width:1px;border-left-color:rgb(204,204,204);border-left-style:solid;padding-left:1ex">pip install ~/Downloads/SimpleITK-0.8.1-cp27-none-macosx_10_6_intel.macosx_10_7_intel.macosx_10_8_intel.macosx_10_9_intel.macosx_10_10_intel.whl </blockquote><div> </div><div>but still get the same error.</div><div><br></div></div></div></blockquote><div><br></div><div>This does not look like a SimpleITK installation error. You can verify that be checking if you are able to do other things with SimpleITK.</div><div><br></div><div>Perhaps you should inspect the file for corruption? Check it's size? see if you can unzip it? See if another program can read it?</div><div><br></div><div>Can you share the file?</div><div><br></div><div>Brad</div><br><blockquote type="cite"><div dir="ltr"><div><div>FYI: I'm running with pip (1.5.6), setuptools (3.6), virtualenv (1.11.6).</div><div><br></div><div><div class="gmail_signature"><div dir="ltr">Cheers,<div>Dave<br></div></div></div></div>
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