<html><head><meta http-equiv="Content-Type" content="text/html charset=iso-8859-1"></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space;">A work around to some of this issue it to add "-fvisibility=default" to CMAKE_CXX_FLAGS. This version of clang appears to be broken with exporting of explicitly instantiated templates.<div><br></div><div>Brad</div><div><br><div><div>On Mar 6, 2014, at 10:18 AM, Fetzer, Andreas <<a href="mailto:a.fetzer@Dkfz-Heidelberg.de">a.fetzer@Dkfz-Heidelberg.de</a>> wrote:</div><br class="Apple-interchange-newline"><blockquote type="cite"><div lang="DE" link="blue" vlink="purple" style="font-family: Helvetica; font-size: 12px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px;"><div class="WordSection1" style="page: WordSection1;"><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><span style="font-size: 11pt; font-family: Calibri, sans-serif; color: rgb(31, 73, 125);">Hi Brad,<o:p></o:p></span></div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><span style="font-size: 11pt; font-family: Calibri, sans-serif; color: rgb(31, 73, 125);"> </span></div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><span lang="EN-US" style="font-size: 11pt; font-family: Calibri, sans-serif; color: rgb(31, 73, 125);">I finally got it working. I had to disable BUILD_TESTING and BUILD_EXAMPLES in CMake.<o:p></o:p></span></div><p class="MsoHeading8" style="margin: 10pt 0cm 0.0001pt; page-break-after: avoid; font-size: 10pt; font-family: Cambria, serif; color: rgb(64, 64, 64);"><span lang="EN-US" style="font-size: 11pt; font-family: Calibri, sans-serif; color: rgb(31, 73, 125);">I will try to set up a dartclient this week. Is there a way in the dashboard script to force the build as shared libraries?<o:p></o:p></span></p><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><span lang="EN-US" style="font-size: 11pt; font-family: Calibri, sans-serif; color: rgb(31, 73, 125);"> </span></div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><span lang="EN-US" style="font-size: 11pt; font-family: Calibri, sans-serif; color: rgb(31, 73, 125);">Thanks a lot again!<o:p></o:p></span></div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><span lang="EN-US" style="font-size: 11pt; font-family: Calibri, sans-serif; color: rgb(31, 73, 125);"> </span></div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><span lang="EN-US" style="font-size: 11pt; font-family: Calibri, sans-serif; color: rgb(31, 73, 125);">Andreas<o:p></o:p></span></div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><span lang="EN-US" style="font-size: 11pt; font-family: Calibri, sans-serif; color: rgb(31, 73, 125);"> </span></div><div><div style="border-style: solid none none; border-top-color: rgb(181, 196, 223); border-top-width: 1pt; padding: 3pt 0cm 0cm;"><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><b><span lang="EN-US" style="font-size: 10pt; font-family: Tahoma, sans-serif;">From:</span></b><span lang="EN-US" style="font-size: 10pt; font-family: Tahoma, sans-serif;"><span class="Apple-converted-space"> </span>Bradley Lowekamp [<a href="mailto:blowekamp@mail.nih.gov" style="color: purple; text-decoration: underline;">mailto:blowekamp@mail.nih.gov</a>]<span class="Apple-converted-space"> </span><br><b>Sent:</b><span class="Apple-converted-space"> </span>Mittwoch, 5. März 2014 17:38<br><b>To:</b><span class="Apple-converted-space"> </span>Matt McCormick<br><b>Cc:</b><span class="Apple-converted-space"> </span>Fetzer, Andreas;<span class="Apple-converted-space"> </span><a href="mailto:community@itk.org" style="color: purple; text-decoration: underline;">community@itk.org</a><br><b>Subject:</b><span class="Apple-converted-space"> </span>Re: [ITK Community] Linker errors on Mac 10.7 with ITK 4.5.1<o:p></o:p></span></div></div></div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><o:p> </o:p></div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;">Hello,<o:p></o:p></div><div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><o:p> </o:p></div></div><div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;">I was unable to reproduce your error on the current release branch.<o:p></o:p></div></div><div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><o:p> </o:p></div></div><div><div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><span style="font-size: 8.5pt; font-family: Menlo, serif;">$ clang --version<o:p></o:p></span></div></div><div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><span style="font-size: 8.5pt; font-family: Menlo, serif;">Apple clang version 3.1 (tags/Apple/clang-318.0.54) (based on LLVM 3.1svn)<o:p></o:p></span></div></div><div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><span style="font-size: 8.5pt; font-family: Menlo, serif;">Target: x86_64-apple-darwin11.4.2<o:p></o:p></span></div></div><div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><span style="font-size: 8.5pt; font-family: Menlo, serif;">Thread model: posix<o:p></o:p></span></div></div></div><div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><o:p> </o:p></div></div><div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><span style="font-size: 8.5pt; font-family: Menlo, serif;">$ CC=/usr/bin/clang CXX=/usr/bin/clang++ cmake DBUILD_SHARED_LIBS:BOOL=ON ../ITK && make -j 6<o:p></o:p></span></div></div><div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><span style="font-size: 8.5pt; font-family: Menlo, serif;"> </span></div></div><div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><span style="font-size: 8.5pt; font-family: Menlo, serif;">This compiled fine for me.<o:p></o:p></span></div></div><div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><span style="font-size: 8.5pt; font-family: Menlo, serif;"> </span></div></div><div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><span style="font-size: 8.5pt; font-family: Menlo, serif;">Brad<o:p></o:p></span></div></div><div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><span style="font-size: 8.5pt; font-family: Menlo, serif;"> </span></div></div><div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><span style="font-size: 8.5pt; font-family: Menlo, serif;">On Mar 5, 2014, at 11:17 AM, Matt McCormick <<a href="mailto:matt.mccormick@kitware.com" style="color: purple; text-decoration: underline;">matt.mccormick@kitware.com</a>> wrote:<o:p></o:p></span></div></div><div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><br><br><o:p></o:p></div><div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;">Hi Andreas,<o:p></o:p></div><div><p class="MsoNormal" style="margin: 0cm 0cm 12pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><o:p> </o:p></p><div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;">On Wed, Mar 5, 2014 at 10:32 AM, Fetzer, Andreas <<a href="mailto:a.fetzer@dkfz-heidelberg.de" target="_blank" style="color: purple; text-decoration: underline;">a.fetzer@dkfz-heidelberg.de</a>> wrote:<o:p></o:p></div><div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><span style="font-size: 11pt; font-family: Calibri, sans-serif; color: rgb(31, 73, 125);">Hi Matt,</span><o:p></o:p></div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><span style="font-size: 11pt; font-family: Calibri, sans-serif; color: rgb(31, 73, 125);"> </span><o:p></o:p></div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><span lang="EN-US" style="font-size: 11pt; font-family: Calibri, sans-serif; color: rgb(31, 73, 125);">yes I have seen that the patch was merge into your release branch. However I still get linker errors. This time for itk::NumericTraits:</span><o:p></o:p></div><div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><span lang="EN-US" style="font-size: 11pt; font-family: Calibri, sans-serif; color: rgb(31, 73, 125);"> </span><o:p></o:p></div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><span lang="EN-US" style="font-size: 11pt; font-family: Calibri, sans-serif; color: rgb(31, 73, 125);">Linking CXX executable ../../../../bin/ITKCommon1TestDriver</span><o:p></o:p></div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><span lang="EN-US" style="font-size: 11pt; font-family: Calibri, sans-serif; color: rgb(31, 73, 125);">Undefined symbols for architecture x86_64:</span><o:p></o:p></div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><span lang="EN-US" style="font-size: 11pt; font-family: Calibri, sans-serif; color: rgb(31, 73, 125);"> "itk::NumericTraits<itk::CovariantVector<char, 1u> >::Zero", referenced from:</span><o:p></o:p></div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><span lang="EN-US" style="font-size: 11pt; font-family: Calibri, sans-serif; color: rgb(31, 73, 125);"> void CheckFixedArrayTraits<itk::CovariantVector<char, 1u> >(itk::CovariantVector<char, 1u> const&) in itkNumericTraitsTest.cxx.o</span><o:p></o:p></div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><span lang="EN-US" style="font-size: 11pt; font-family: Calibri, sans-serif; color: rgb(31, 73, 125);"> "itk::NumericTraits<itk::CovariantVector<char, 1u> >::One", referenced from:</span><o:p></o:p></div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><span lang="EN-US" style="font-size: 11pt; font-family: Calibri, sans-serif; color: rgb(31, 73, 125);"> void CheckFixedArrayTraits<itk::CovariantVector<char, 1u> >(itk::CovariantVector<char, 1u> const&) in itkNumericTraitsTest.cxx.o</span><o:p></o:p></div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><span lang="EN-US" style="font-size: 11pt; font-family: Calibri, sans-serif; color: rgb(31, 73, 125);"> "itk::NumericTraits<itk::CovariantVector<signed char, 1u> >::Zero", referenced from:</span><o:p></o:p></div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><span lang="EN-US" style="font-size: 11pt; font-family: Calibri, sans-serif; color: rgb(31, 73, 125);"> void CheckFixedArrayTraits<itk::CovariantVector<signed char, 1u> >(itk::CovariantVector<signed char, 1u> const&) in itkNumericTraitsTest.cxx.o</span><o:p></o:p></div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><span lang="EN-US" style="font-size: 11pt; font-family: Calibri, sans-serif; color: rgb(31, 73, 125);"> "itk::NumericTraits<itk::CovariantVector<signed char, 1u> >::One", referenced from:</span><o:p></o:p></div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><span lang="EN-US" style="font-size: 11pt; font-family: Calibri, sans-serif; color: rgb(31, 73, 125);"> void CheckFixedArrayTraits<itk::CovariantVector<signed char, 1u> >(itk::CovariantVector<signed char, 1u> const&) in itkNumericTraitsTest.cxx.o</span><o:p></o:p></div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><span lang="EN-US" style="font-size: 11pt; font-family: Calibri, sans-serif; color: rgb(31, 73, 125);"> "itk::NumericTraits<itk::CovariantVector<unsigned char, 1u> >::Zero", referenced from:</span><o:p></o:p></div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><span lang="EN-US" style="font-size: 11pt; font-family: Calibri, sans-serif; color: rgb(31, 73, 125);"> void CheckFixedArrayTraits<itk::CovariantVector<unsigned char, 1u> >(itk::CovariantVector<unsigned char, 1u> const&) in itkNumericTraitsTest.cxx.o</span><o:p></o:p></div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><span lang="EN-US" style="font-size: 11pt; font-family: Calibri, sans-serif; color: rgb(31, 73, 125);"> </span><o:p></o:p></div></div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><span lang="EN-US" style="font-size: 11pt; font-family: Calibri, sans-serif; color: rgb(31, 73, 125);">Is this already know to you?</span><o:p></o:p></div></div><div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><o:p> </o:p></div></div><div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;">No. If this platform is important to you, please consider setting up a Nightly dashboard submission [1]. Inspecting the code, I do not see the issue. The symbol appears to be created [2] with the correct exports [3]. Maybe a dashboard submission will show details that will help us work together to fix the issue.<o:p></o:p></div></div><div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"> <o:p></o:p></div></div><blockquote style="border-style: none none none solid; border-left-color: rgb(204, 204, 204); border-left-width: 1pt; padding: 0cm 0cm 0cm 6pt; margin-left: 4.8pt; margin-right: 0cm;"><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><span lang="EN-US" style="font-size: 11pt; font-family: Calibri, sans-serif; color: rgb(31, 73, 125);">When will the 4.5.2 be released?</span><o:p></o:p></div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><span lang="EN-US" style="font-size: 11pt; font-family: Calibri, sans-serif; color: rgb(31, 73, 125);">Our own release is scheduled for the end of March. Before that we would like to solve the linker errors in ITK.</span><o:p></o:p></div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><span lang="EN-US" style="font-size: 11pt; font-family: Calibri, sans-serif; color: rgb(31, 73, 125);"> </span><o:p></o:p></div></blockquote><div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><o:p> </o:p></div></div><div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;">If we can get issue fixed, we would be happy to coordinate with you and get 4.5.2 released in later in March before your release.<o:p></o:p></div></div><div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><o:p> </o:p></div></div><div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;">Thanks,<o:p></o:p></div></div><div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;">Matt <o:p></o:p></div></div><div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><o:p> </o:p></div></div><div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;">[1] <a href="http://www.itk.org/Wiki/ITK/Git/Dashboard" style="color: purple; text-decoration: underline;">http://www.itk.org/Wiki/ITK/Git/Dashboard</a><o:p></o:p></div></div><div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><o:p> </o:p></div></div><div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;">[2] <a href="http://itk.org/gitweb?p=ITK.git;a=blob;f=Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h;h=1db158e8800fb156b8ae1cb491ac6020f2a6b296;hb=HEAD#l187" style="color: purple; text-decoration: underline;">http://itk.org/gitweb?p=ITK.git;a=blob;f=Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h;h=1db158e8800fb156b8ae1cb491ac6020f2a6b296;hb=HEAD#l187</a><o:p></o:p></div></div><div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><o:p> </o:p></div></div><div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;">[3] <a href="http://itk.org/gitweb?p=ITK.git;a=blob;f=Modules/Core/Common/src/itkNumericTraitsCovariantVectorPixel.cxx;h=e63057e8b6ad4eae24844f077caec2ea486d0f96;hb=HEAD#l22" style="color: purple; text-decoration: underline;">http://itk.org/gitweb?p=ITK.git;a=blob;f=Modules/Core/Common/src/itkNumericTraitsCovariantVectorPixel.cxx;h=e63057e8b6ad4eae24844f077caec2ea486d0f96;hb=HEAD#l22</a><o:p></o:p></div></div><div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><o:p> </o:p></div></div><div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;"><o:p> </o:p></div></div></div></div></div><div style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: 'Times New Roman', serif;">_______________________________________________<br>Community mailing list<br><a href="mailto:Community@itk.org" style="color: purple; text-decoration: underline;">Community@itk.org</a><br><a href="http://public.kitware.com/cgi-bin/mailman/listinfo/community" style="color: purple; text-decoration: underline;">http://public.kitware.com/cgi-bin/mailman/listinfo/community</a></div></div></div></div></blockquote></div><br></div></body></html>