<div dir="ltr">Yes, ITK4.3 compiled GCC & G++ set to version 4.6 - Worked<div>Earlier I was using GCC-4.8 (Default in Ubuntu 13.10)</div><div><br></div><div>Alok</div></div><div class="gmail_extra"><br><br><div class="gmail_quote">
On Tue, Feb 25, 2014 at 2:53 PM, Luis Ibanez <span dir="ltr"><<a href="mailto:luis.ibanez@kitware.com" target="_blank">luis.ibanez@kitware.com</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
<div dir="ltr">Hi Alok,<div><br></div><div><br></div><div>So, just to make sure that I understand.</div><div><br></div><div>When building ITK 4.3 with GCC 4.6, the problem went away ?</div><div><br></div><div>What GCC version were you using previously ?</div>
<div><br></div><div> Thanks</div><span class="HOEnZb"><font color="#888888"><div><br></div><div> Luis</div></font></span></div><div class="HOEnZb"><div class="h5"><div class="gmail_extra"><br><br><div class="gmail_quote">
On Tue, Feb 25, 2014 at 1:36 PM, Alok <span dir="ltr"><<a href="mailto:alok.theanomaly@gmail.com" target="_blank">alok.theanomaly@gmail.com</a>></span> wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr">Hi Luis,<div><br></div><div>I have not tried out what you suggested yet. But I built ITK again with g++-4.6 and gcc-4.6 and its working for me now.</div>
<div><br></div><div>I am currently using ITK-4.3 since the project I am working on was written using this version of ITK. </div>
<div><br></div><div>Does that make any sense?</div><div><br></div><div>Thanks</div><span><font color="#888888"><div>Alok</div></font></span></div><div><div><div class="gmail_extra">
<br><br><div class="gmail_quote">On Tue, Feb 25, 2014 at 10:45 AM, Luis Ibanez <span dir="ltr"><<a href="mailto:luis.ibanez@kitware.com" target="_blank">luis.ibanez@kitware.com</a>></span> wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr">Hi Alok,<div><br></div><div>It may help to inspect closely the output on</div><div><br></div><div><pre style="vertical-align:top;line-height:1.2em;font-size:10px;margin-bottom:0px;margin-top:0px;border:0px none white;padding:0px;background-image:none">
<span style="color:rgb(0,0,255)">const</span> ReaderType<span style="color:rgb(0,128,128)">::</span><span style="color:rgb(0,119,136)">FileNamesContainer</span> <span style="color:rgb(0,0,64)">&</span> filenames <span style="color:rgb(0,0,128)">=</span>
inputNames<span style="color:rgb(0,0,64)">-</span><span style="color:rgb(0,0,128)">></span>GetInputFileNames<span style="color:rgb(0,128,0)">(</span><span style="color:rgb(0,128,0)">)</span><span style="color:rgb(0,128,128)">;</span></pre>
<pre style="vertical-align:top;line-height:1.2em;font-size:10px;margin-bottom:0px;margin-top:0px;border:0px none white;padding:0px;background-image:none"><span style="color:rgb(0,128,128)"><br>
</span></pre><pre style="vertical-align:top;line-height:1.2em;font-size:10px;margin-bottom:0px;margin-top:0px;border:0px none white;padding:0px;background-image:none"><br></pre><pre style="vertical-align:top;line-height:1.2em;font-size:10px;margin-bottom:0px;margin-top:0px;border:0px none white;padding:0px;background-image:none">
<span style="color:rgb(0,128,128)"><div style="color:rgb(34,34,34);font-family:arial;font-size:small;line-height:normal;white-space:normal">Something must be going on with the location of the Directory name,</div>
<div style="color:rgb(34,34,34);font-family:arial;font-size:small;line-height:normal;white-space:normal">(e.g. maybe spaces in the path ?), or maybe a mixture of extraneous</div><div style="color:rgb(34,34,34);font-family:arial;font-size:small;line-height:normal;white-space:normal">
files in the DICOM directory.</div><div style="color:rgb(34,34,34);font-family:arial;font-size:small;line-height:normal;white-space:normal"><br></div><div style="color:rgb(34,34,34);font-family:arial;font-size:small;line-height:normal;white-space:normal">
<br></div><div style="color:rgb(34,34,34);font-family:arial;font-size:small;line-height:normal;white-space:normal"> HTH</div><div style="color:rgb(34,34,34);font-family:arial;font-size:small;line-height:normal;white-space:normal">
<br></div><div style="color:rgb(34,34,34);font-family:arial;font-size:small;line-height:normal;white-space:normal"><br></div><div style="color:rgb(34,34,34);font-family:arial;font-size:small;line-height:normal;white-space:normal">
Luis</div><div style="color:rgb(34,34,34);font-family:arial;font-size:small;line-height:normal;white-space:normal"><br></div><div><br></div></span></pre></div></div><div class="gmail_extra"><br><br><div class="gmail_quote">
<div><div>
On Tue, Feb 25, 2014 at 8:22 AM, Alok <span dir="ltr"><<a href="mailto:alok.theanomaly@gmail.com" target="_blank">alok.theanomaly@gmail.com</a>></span> wrote:<br></div></div><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
<div><div>
<div dir="ltr"><div class="gmail_quote"><br><br><div dir="ltr">Hi,<div><br></div><div>I have a problem reading in DiCOM image series when running ITK on Ubuntu 13.10 (32-bit)</div><div><br></div><div>I have a DICOM image series and I am trying to run the ResampleDICOM example here - <a href="http://www.itk.org/Wiki/ITK/Examples/DICOM/ResampleDICOM" target="_blank">http://www.itk.org/Wiki/ITK/Examples/DICOM/ResampleDICOM</a></div>
<div><br></div><div><b>At runtime</b> I get an error which looks like :</div><div>WARNING: In .../InsightToolkit-4.3.1/Modules/IO/GDCM/src/itkGDCMSeriesFileNames.cxx, line 114</div><div>GDCMSeriesFileNames (0xa12e9e0): No Series can be found, make sure your restrictions are not too strong</div>
<div><br></div><div>Exception thrown while reading the series</div><div><br></div><div>itk::ExceptionObject (0xa133fe8)</div><div>Location: "unknown" </div><div>File: /usr/local/include/ITK-4.3/itkImageSeriesReader.hxx</div>
<div>Line: 131</div><div>Description: itk::ERROR: ImageSeriesReader(0xa1312a0): At least one filename is required. </div><div><br></div><div><br></div><div>When I run it on a machine with Ubuntu 12.04 (using the same DICOM series) it runs through - The output is as below:</div>
<div><br></div><div><div>The input series in directory /home/alok/data/HSSPlan/Left/dicom/ has 219 files with spacing [0.347656, 0.347656, 1]</div><div>The output series in directory ./output/ has 219 files with spacing [0.347656, 1, 1]</div>
</div><div><br></div><div>Any suggestions/comments much appreciated</div><div><br></div><div>Thanks</div><span><font color="#888888"><div>Alok</div><span><font color="#888888"><div><br></div><div><br clear="all">
<div><br></div>-- <br>
<div dir="ltr">I live a simple life... in 0s and 1s !</div>
</div></font></span></font></span></div><span><font color="#888888">
</font></span></div><span><font color="#888888"><br><br clear="all"><div><br></div>-- <br><div dir="ltr">I live a simple life... in 0s and 1s !</div>
</font></span></div>
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</blockquote></div><br><br clear="all"><div><br></div>-- <br><div dir="ltr">I live a simple life... in 0s and 1s !</div>
</div>
</div></div></blockquote></div><br></div>
</div></div></blockquote></div><br><br clear="all"><div><br></div>-- <br><div dir="ltr">I live a simple life... in 0s and 1s !</div>
</div>