<div dir="ltr"><div><div><div><div>Hi Bill, <br><br></div><div>This is great.<br></div><div><br></div>Would it be possible to update the SkullStripper extension so that it externally build the ITK remote module and use it ? Alternatively, you could copy the files "itkStripTsImageFilter.*" specifying from which revision of the remote module they are based of. Shell script to do so should probably be generalized and made available ... <br>

<br></div>That would avoid code duplication and ease maintenance.<br><br></div>Thanks<br></div>Jc<br><div><div><br></div></div></div><div class="gmail_extra"><br><br><div class="gmail_quote">On Thu, Jan 16, 2014 at 12:28 PM, Bill Lorensen <span dir="ltr"><<a href="mailto:bill.lorensen@gmail.com" target="_blank">bill.lorensen@gmail.com</a>></span> wrote:<br>

<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">A Skull Stripping filter that removes face/skull from MRI data and<br>
creates a mask for the brain. This is a common preprocessing step for<br>
segmenting MRI brains and their contents.<br>
<br>
NOTE: This algorithm is also availiable as a Slicer extension:<br>
<a href="https://www.slicer.org/slicerWiki/index.php/Documentation/4.2/Extensions" target="_blank">https://www.slicer.org/slicerWiki/index.php/Documentation/4.2/Extensions</a><br>
<br>
Following the process here:<br>
<a href="http://www.itk.org/Wiki/ITK/Policy_and_Procedures_for_Adding_Remote_Modules" target="_blank">http://www.itk.org/Wiki/ITK/Policy_and_Procedures_for_Adding_Remote_Modules</a><br>
<br>
1) A Skull-Stripping Filter for ITK Bauer S., Fejes T., Reyes M.<br>
<a href="http://www.insight-journal.org/browse/publication/859" target="_blank">http://www.insight-journal.org/browse/publication/859</a><br>
<br>
2) Nightly Dashboard<br>
<a href="http://open.cdash.org/index.php?project=Insight&filtercount=2&showfilters=1&filtercombine=and&field1=site/string&compare1=63&value1=BillsAmazon&field2=buildname/string&compare2=63&value2=SkullStrip" target="_blank">http://open.cdash.org/index.php?project=Insight&filtercount=2&showfilters=1&filtercombine=and&field1=site/string&compare1=63&value1=BillsAmazon&field2=buildname/string&compare2=63&value2=SkullStrip</a><br>


<br>
3) Gerrit patch<br>
<a href="http://review.source.kitware.com/#/c/14054/" target="_blank">http://review.source.kitware.com/#/c/14054/</a><br>
<br>
4) Notify list<br>
<br>
Bill<br>
<br>
<br>
--<br>
Unpaid intern in BillsBasement at noware dot com<br>
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